| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4933 |
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| Symbol | |
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| ID | 8547341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6808799 |
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| End bp | 6810127 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646389607 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_003269315 |
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| Protein GI | 262198106 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCTCT CTGAGCTGGT CGAGACCTCG CGCCAGGTGG CAGCGACGCG CAGCCGACGA
CGCAAGTCCG CGGCGCTGGC GGCGTGTCTG CGCACGGCCG AGCCGGAGCT GCGCGCGACG
GTGTGCGCGT ACCTGGCCGG GACCATGCCG CAGGGCCGGA TCGGCCTGGG CTGGCGCATG
CTGGCCGCGC TCGAGGTGGC GCCGCAACCG CAAGCGGTGG TGACGGTGGC CGAGCTCGAC
GCGTGCCTGA GCGCGATCGC GGCGATGTCG GGCGCGGGCT CCAAAGAGCG GCGTCTGCAG
GCGCTGAGCG CGCTTTTGGC CCGCGCGACC GAGGCGGAGC AGCACTTCGT GCGCCAGCTC
GTGCTCGGCG AGCTGCGCCA GGGCGCGCTC GCGGGGCTGA TGCTCGAGGC GCTGGCGCAG
GCGGCCGCGG TCCCGCTGGC CGAGCTGCGA CGGGCGTTCA TGCTCGCCGG CGATCTCGGC
GCGGTGGCCG AGGCGGCGCA GGCGCGCGGC AGCGAGGGCC TGGCCGGCTT CGCGCTGGAG
CTGTTTCGCC CGCTGCTGCC GATGCTGGCC AAGCCGGCGA GCGATGTCGG CGAGATTCTC
GGACGGATGG ACGAAGCCGC CTTCGAGTTC AAGCTCGACG GCGCGCGGGT GCAGGTGCAC
AAGGACGACG ACGAGGTGCG CGTGTACACG CGCCAGCAGA ACGAGATCAG CGCAGCGGTG
CCGGAGCTGG TCGAGGCCGC GCGCGCGTTG CCGAGGCAGC GGCTGATCCT CGACGGCGAG
GCCATCGCGC TGCGCCCGGA CGGCGGGCCG CAGCCCTTTC AGGTGACGAT GGAGCGCTTC
GGCCGCCGGC GCGATGTCGC CGCGCTGCGC GCCGCGCTGC CGCTCTCGGG TTTCTTTTTC
GACTGCCTGT ACGCCGACCG GCCGCTCATC GACGCCCCGG GACGCGAGCG CCTGGCCGCG
CTCGACGCCA TCGTGCCCGA GGCGCTGCGG GTGCCGCGGC GGAGCGGCTG GCTGAGCAAT
CTGCACCTGG GCGCGCGCGA CCCGGCCGGC GGCTTCGTCA TGCTGGGCAA GACCTTCAAG
GGGCTGAGCG ACGAGCTGCT GGCCTGGCAG ACCGAACGCC TGCTGGCGCT GGAGACCCAT
CGCGAGCAAC ACGTGGTCTG GGTGCGGCCG GCGCTGGTGG TCGAGATCGC GTTCGGCGAT
GTGCAGCGCA GCTCGCAGTA CCCGGGCGGG CTGGCCCTGC GCTTCGCCCG GGTCAAGGGC
TACCGCGCCG ACAAGGACGC GGCCGCGGCC GATACCATTG ACGCGGTGCG TGCTCTACAC
AGCGGCTGA
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| Protein sequence | MLLSELVETS RQVAATRSRR RKSAALAACL RTAEPELRAT VCAYLAGTMP QGRIGLGWRM
LAALEVAPQP QAVVTVAELD ACLSAIAAMS GAGSKERRLQ ALSALLARAT EAEQHFVRQL
VLGELRQGAL AGLMLEALAQ AAAVPLAELR RAFMLAGDLG AVAEAAQARG SEGLAGFALE
LFRPLLPMLA KPASDVGEIL GRMDEAAFEF KLDGARVQVH KDDDEVRVYT RQQNEISAAV
PELVEAARAL PRQRLILDGE AIALRPDGGP QPFQVTMERF GRRRDVAALR AALPLSGFFF
DCLYADRPLI DAPGRERLAA LDAIVPEALR VPRRSGWLSN LHLGARDPAG GFVMLGKTFK
GLSDELLAWQ TERLLALETH REQHVVWVRP ALVVEIAFGD VQRSSQYPGG LALRFARVKG
YRADKDAAAA DTIDAVRALH SG
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