| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4892 |
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| Symbol | |
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| ID | 8547299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6757665 |
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| End bp | 6758273 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646389565 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003269274 |
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| Protein GI | 262198065 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.428217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.889748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCAACTC ATTCTCTCGT ATGTGAACAG GAGGTGCGCC CCTCCCAAGC CAGAGCCGTG
ACCCGCGAGC GCGTCCTCAC CGAGTTGGCC ACGCGGGCCG CGCCTCGCGG CTATCGCATC
GCCTACGATC TATTGCGCTC GCGCGCCGAA GCCGAAGACG CCGTCCAGGA AGCCCTGGCC
CGCGCCTGCG CCTCGAGCGA CGACTTGCGC GACCCCGACG CGCTCGAGGG CTGGTTCTTC
CGCGTGCTCA CCAACCTGTG CATGCGCAGC CTGCGCCGCC GCCGCGTGCG CCGCTGGCTC
GGCCTGGCCA GCGACGCCGA GCAGCCCGCC GACAGCGACA AGGGCCCGCC CGCCTCCGAG
CACGCGGCCG CCCCCGCCGA GCGCACCCGC GCCGATCACT CCCTGGCCCG CAACCAGGAG
ATCGCCCACA TGCTCGGCGC CCTCGAGCGC CTGCCCACCA AGCAGCGCGT CGCCCTGGTC
CTGCGCTACG GCCAGGACCT GCCCATCGCC GAGATCGCCG CCATGCTCGC GGTCGAGCCG
GCCACCGTCA AAACTCACCT CGTCCGCGGC ATGCGCCGCC TCCGCACCGT CATGGAGCGT
TTGTCATGA
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| Protein sequence | MPTHSLVCEQ EVRPSQARAV TRERVLTELA TRAAPRGYRI AYDLLRSRAE AEDAVQEALA
RACASSDDLR DPDALEGWFF RVLTNLCMRS LRRRRVRRWL GLASDAEQPA DSDKGPPASE
HAAAPAERTR ADHSLARNQE IAHMLGALER LPTKQRVALV LRYGQDLPIA EIAAMLAVEP
ATVKTHLVRG MRRLRTVMER LS
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