| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4890 |
|---|
| Symbol | |
|---|
| ID | 8547297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 6755889 |
|---|
| End bp | 6756395 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646389563 |
|---|
| Product | peptidylprolyl isomerase FKBP-type |
|---|
| Protein accession | YP_003269272 |
|---|
| Protein GI | 262198063 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.291864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.844558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACC GCGAGCCCAT GTCCAGAATC GCCGACAAGA AGGTCGCCTT TATCCACTAC
ACACTCACCG ACGACGAGGG CGAGGAGATC GATAGCTCGC GCGATGGGGA TCCGATGCCC
TATCTGCACG GCTGCCACAA TATTGTGCCC GGTCTCGAGC GCGAGCTCGA GGGCAAGAGT
GTGGGCGATC GCGTGCGCGC GGTGGTCGCC CCCGAGGACG GCTACGGCCC GAGCTCGGGC
GAGGCCGCCC AGGCTGTGCC GCGCGAGGCC TTCGAAGGGA TGGAGCCGGA ACCGGGTATG
CCCCTGATGC TGGAAGATGA TGACGGCGAT CAGTTCCCCA TGTGGGTGGT CGAGGTCAGC
GATGAGGCGG TGGTGCTGTC CCCAGACCAC CCGCTCGCCG GCGTGACCCT GCACTTCGAG
GTCGAGATCG TGGAGATCCG CGACGCCACG GCGGTGGAAC TGGAACACGG CCACGCCCAC
CCCGGCGACG GCCACCATCA TCATTGA
|
|---|
| Protein sequence | MLNREPMSRI ADKKVAFIHY TLTDDEGEEI DSSRDGDPMP YLHGCHNIVP GLERELEGKS
VGDRVRAVVA PEDGYGPSSG EAAQAVPREA FEGMEPEPGM PLMLEDDDGD QFPMWVVEVS
DEAVVLSPDH PLAGVTLHFE VEIVEIRDAT AVELEHGHAH PGDGHHHH
|
|---|
| |