Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4861 |
Symbol | |
ID | 8547268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 6710190 |
End bp | 6712253 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646389534 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_003269243 |
Protein GI | 262198034 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0506026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATGGC AGCAGGACCG AGAGCTTGAA ACACGTCTAA CGCGGACGGC CGCGGGGGCG CTCATCGCAC TTGGCGCGGT GGTCTTCTTC TTGGGATGGT GGGCCGACAT CACCGTCGTG CGCACCCTGG GGCCGGGGTT GGCGTCGATG AAGGTCAACA CCGCCCTGTG CTTCATTGCC AGCGGAGTGG CCCTGTGGCG CCTGCTGCGG CGCGAAGAGC TGGCGCGGGC GTCGCGTTTG ACCGATGCCC TGGCCCTGTT GGTGATCGGC ATCAGCGGCT CCTCGCTGCT CGCCGATACC TTTCATTGGT CGCTGTGGAT CGACGAGTTT CTGTTCACCG ATCCCAACCC GCGCGGCATG CCGTGGCCCG GGCGGATGAG CCCGGCGACC GCCTTTGGGC TCACGCTCGT GGGCATGTGC CTGCTCAGCT ATGATCGCAA GGGAATCGAG CGGGTGTGGT TGCCGCATCT GCTCGGGGCG CTGGTCTCGC TCAACGGCTT GATCGCCGTG GTTGGTTACG CCTACGGCGT GAGCGCCCTG TATCAAGTGC GGCCCTACGT GTCCATGGCG CTGCACACCG CCACTGCCTT CCTGCTGCTC GGTATCGGCT TGGTGTCGGT GCCGCCGTGG CGCGGCATAC CCGGTCTGCT GCTCACCGCC GGGTCGGACG GTCGCATGCT GCGTCGGCTG TTGCCGATTG CGCTGTTGGT GCCGCTGGTG CTGGGCTGGA TGGCCATGCA GGGCAGCCAC AATGGTTGGT ACGGCTCGCG TTTTGGCTTT GTGCTGGCGG CGCTGGCGAG CTCGCTGTTG CTGGTGAGCG TGGTCGGCCG CACCGGCCTG GTGCTGGGCC GAGCCGAGCG CGCGCGTCGG CGGGCGCTGC AGCAACTGAG CGAGCAGGAA GAGTGGCTGT CGACTACCTT GTCGAGCATT GCCGACGGCG TCATCGCCAC CGACCAGGGC GCTCGCATCT CATTCGCCAA CCCGGCCGCG TGCGAGCTGC TCGGACGGGA CCTCGACAGC CTGATCAAAC AACCCATCGA CGAGTGCTTC GATGTCGTGG ACACAGCGAC CGGGGAGCCC GCCGTGTTAC CCGTCCACGC CGTATTGGCG TCGGGAAAAG CGAGCGCGTT GGAAGAGACC TGCGAGCTGC GCCGGGACGA CGGCACACGC ATCGCCATCG CCGATGCATG CACACCCCTC GCCGGCGCGG ACGGCGTCAT GCGCGGCGCT GTGTTGATCT TCCGCGACGT CTCGAGCGAG CGTGCGGCGG CCGCGGCCGT GAAAAAGGCC TCCGAATACA AAGATCAGTT TTTGGCCATG CTCGGCCACG AGCTGCGCAA TCCGCTGTCG GCGATCTGCA ACGCCACGCG CTTGCTGGAG GTCCTGGTGC AGCACAACGA CGCCAAGCTA CAGCGACCCG TCGACGTGTT GGCGCGGCAG AGCGAGAACC TCACCTTACT CGTCGACGAT CTGCTCGACG TCTCGCGGGT CGCCCGCGGC AAGCTGGCGA TCGAGACGAG TCGGCTCGAC CCGCGCAGCG TGCTGCGCAA CGTCCTCGAC GATATGCGGG TCAAGGCCGA GAATCGCTCA CTGCGCCTGT TCGCCGAGAT CGCCGGCGGT AGCGACGACG ACCCCGGCGA CGGAGAGATG ACGATTCTGG GCGATTCTGT ACGCCTGTAC CAGATATTTG GCAACGTCGT CGGCAACGCG ATCAAGTTCA CCGATGAGGG CGAAGTGCGG GTATCGATGA TGCGGGAAGG GGATGAGATC GTTCTGCGCG TGAGCGACAC CGGCATGGGC ATGACGGATG AGGAGCTGGC GCTGGTGTTC GAGCCCTTTC AGCAGGGCGA GCAGGGCTTC CACCGCCCGC AAGGCGGGCT GGGGCTGGGG CTGAGCGTGG TCAAGGGCCT GGTGGTCCTG CACGACGGCA CCGTCGAGGC GCACAGTGAG GGACGGGGGC AGGGCACCAC CATGACCTTG CGCTTCCCCT GCGCGCCGGT GCGGGCGCGC ACCAATCAGC CGGTTTCGAA CTCCGAGCCA TCGTTATCGT CATCGTCCGA GTGA
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Protein sequence | MTWQQDRELE TRLTRTAAGA LIALGAVVFF LGWWADITVV RTLGPGLASM KVNTALCFIA SGVALWRLLR REELARASRL TDALALLVIG ISGSSLLADT FHWSLWIDEF LFTDPNPRGM PWPGRMSPAT AFGLTLVGMC LLSYDRKGIE RVWLPHLLGA LVSLNGLIAV VGYAYGVSAL YQVRPYVSMA LHTATAFLLL GIGLVSVPPW RGIPGLLLTA GSDGRMLRRL LPIALLVPLV LGWMAMQGSH NGWYGSRFGF VLAALASSLL LVSVVGRTGL VLGRAERARR RALQQLSEQE EWLSTTLSSI ADGVIATDQG ARISFANPAA CELLGRDLDS LIKQPIDECF DVVDTATGEP AVLPVHAVLA SGKASALEET CELRRDDGTR IAIADACTPL AGADGVMRGA VLIFRDVSSE RAAAAAVKKA SEYKDQFLAM LGHELRNPLS AICNATRLLE VLVQHNDAKL QRPVDVLARQ SENLTLLVDD LLDVSRVARG KLAIETSRLD PRSVLRNVLD DMRVKAENRS LRLFAEIAGG SDDDPGDGEM TILGDSVRLY QIFGNVVGNA IKFTDEGEVR VSMMREGDEI VLRVSDTGMG MTDEELALVF EPFQQGEQGF HRPQGGLGLG LSVVKGLVVL HDGTVEAHSE GRGQGTTMTL RFPCAPVRAR TNQPVSNSEP SLSSSSE
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