| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4074 |
|---|
| Symbol | |
|---|
| ID | 8546475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 5596105 |
|---|
| End bp | 5599998 |
|---|
| Gene Length | 3894 bp |
|---|
| Protein Length | 1297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646388750 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003268465 |
|---|
| Protein GI | 262197256 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0173368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTTCG TCTTTACCGG TACAGAGCGC TTCCAGATCC TGCGCCAGCT CGGCGCCGGC
GGCATGGGTG TGGTCTACGA AGCGCTCGAC AACGAGACCA ACAGCCGGGT CGCGCTCAAG
ACCCTGCGCA ATCGCAACGG CGACGCCCTG GTGCGCTTCA AGCGCGAGTT CCGGCTGCTG
CGCAACCTCC AGCACCGCAA CCTCATCGAC CTCAAGGAGC TGCTCGAGGA GCGCGGCCAC
TGGTTCTTCA CCATGGAGCT GATCGAGGGC TGCGACTTCC TCAGCTACGT CGGCCGCCAG
ATCCACGACT CCTTTGATTC GATGGCCAGC ACGCAGGTGC AGCAGCACAG CGGCTCGTAT
CCTCCGGGGC CGATCACGCC CAGCAGATTC CCCGACGAGT TCGCGCCCAC GGCCTGCTAC
CAGGTCGACG AGGCCCGCCT GCGCGACGCC CTGATCCAGC TCGTATGCGG CCTGCAGGTG
CTGCACGGGG CCCACAAGGT GCACCGCGAC GTCAAGCCAT CGAACTGCCT GGTCACCGAT
GAGGGCCGCG TGGTCGTGCT CGACTTCGGC CTGGTGAGCG ACCTGGCTCC GGACAATGAC
TGGGACCGCG AGCGCGACCT GGTGGGCACG GTGCCGTACA TGGCGCCCGA GCAGGCCGCG
TCCAAGCCCG CGCGCCCGCC CGCGGATCTG TACAGCGTGG GCGTGATGCT CTACGAGGCC
CTCACCGGCA TCCTGCCCTT CCCCGGCCCA CCCGGTCTGG TGGCCCAGCT CAAGCAGAGC
GAGCGCCCGA CCGCGCCCAG TATCCTGCTG CCTCAGGTTC CCGCCGATCT CGACGCGCTG
TGCATGGATC TGCTCGAGAT CGTCCCCGAG GACCGACCGA CCTCCGATCA AGTGCTGGCC
CGACTCGGCT ATCGGGCCCC CATCGAGCAC ACGCCGCGGC CCTCGAGCAC GAGCACCTTT
GTCGGCCGCG AGGACGAGCT GGCGGCGCTG CACGAGGCCG CCGAGACCGC GCGCGAGCAC
GCCGTGGCGG TGCTGCTCTC GGGCGAGTCG GGCGTGGGCA AGAGCGCGCT GATCCGTCAC
TTCATCGAGC AGTCCGCGCG CCCCCAGCGG GGCGTCCCGG CGCTGGTGCT GGCGACCGGC
TGCCACGAGC GCGAGGCGGT GCCGTTCAAG GCCTTCGACG GCATCATCGA CTTGCTCAGC
TCGTATCTGG GACGCCTGTC CCAAGACGAT CTGAAAGAGA TCCTGCCCGA GCACGTCAGC
CTGCTGATGC AGGTGTTTCC CGTGCTCGAG CGGGTGCGCG CGATCGTCAA CGCCCCGCGC
AAGTCCGAGC CGCGCGACCC GCAGGAGCAG CGCTTTCGCG TGTTTGGCGC CCTGCGCGCG
CTGTTCGCCA AGCTGGCCGA GCGCGCGCCG CTGATCTTGG TCATCGACGA CATCCAGTGG
TCGGATGCCG ACAGCCGGGC GCTGCTGCAG GAGCTTCTGC GAGCGCCGGA GGCGCCGCGG
CTGATGCTGC TCACCACCCT GCGCACCCCG TGGCGCCGCG GCGCGACCCC CTTCGAGGTC
TCGCCGCGGG TGCCCGCCGC CATCGTCGGC CAGTCGCCGC TCTTGCCGCT GCCGGGCGAG
GACGTGCGCC ACATCGAGCT GCAGCGGCTG CCGCCCCAGG ACGCGCGCGC GCTGGCTCAG
GCGCTGCAAC CCAGCGGCGC CACCTGGTCG ATCGCGACCC TCGAGCGCAT CGCCAGCGAG
TCGAGCGGCC ACCCGCTGTT CCTCGACGAG CTGGCGCGCC ACGTCACCCC CGGGGACGGC
ACCGACCTCA GGTCCTTCCA GCTCGAGGAG GCCCTGTGGA CGCGCATCGC GGCGCTCGAC
ACCGGACCGC GGCGGCTGGT GACCATCGTG TGCGTCGCCG CTCGCCCCAT CGAACAATCG
GTGGCCGCCG AGGTCGCCAA TCTGCCTGCG GAGGAGCTGC AGCGCATGAT GCGCGCGCTC
GAGCTGGGCA AGTTTTTGCG CGCGCGCGGA CCGCGCCTGC GCGACGCGGT CGAGCCCTAC
CACGAGCGCG TCCGCCTGGC GGTTCTCGCC CACATGGACG AAGAAACCCG ACGCGCCTAC
CACGTCGCCA TCGCCGAGGC GCTCGAGGCC GCCGAGGCCG CGCCCGAGGC CCTGGCCTTT
CACTGGGCCG AGGCCGCGCA GATGGCCAAG GCCGCGAGCT ACGCGGTCAC GGCCGCGCTC
GAAGCGGCCA AGGCGCTGGC CTTCTCGCGG GCCGCGCGCA TGTACCGGCT GGCCATCGAC
ATGCGCGAGT GCCTGCCCGA GGACACCATG CGCCGGCTCT ACGTCGGCCT GGGCGAGGCC
CTGGTCAATG ACGGCCGCGG CGACGAAGCC GCCGAAGCCT ACCTCGAAGC CGCCGCGCTC
AGCACCCACG AGGCCGCCCT CGAGCTCAAG CGGCGCGCGG TCGAGCATCG CCTGCGCTGC
GGCCACATCC AGGAGGCCAC GCCGGTGGCC CGCGAGCTGC TCCGCGCTGT GGGTCTGCAC
ATGCCGCGCT CGCAGAGCAG CGCCAAGCTC ATGCTGGTGC TCGAGCGCGC GCGGCTGGCG
CTGCGCGGCA TCCGCTTCGA CGAGCGCGCC GAGTCCGAGC TGCCGCGCGC CACCTTGATG
AAAATCGACG TGTGCTCGTC GATCGCCGGC GGCATCACCA CCGCCGAGCC GTACATCGGC
GCCGGCTTCG TCGCCCGCAA CCTGCGCCTG TCGCTGGACG CGGGCGAGCC CTATCGCGTG
GCCCGGGCGC TGTCGCTGCA GTCCATGGCC ATCTCGGCGC TCGATCCCAA GAACTCGGCG
CACGGCGTGC GCATGCGCGA GCTGGCCCTC GACCTCGCCC ACAAGATCAA GAAACCCCAC
GCCATCGCCG TCGCCGGCGT GGCCGAGGGC TGGTCGCTGT TCTGGCGCGG CCAGTGGAAG
CGCGCCCTGC CCGCGCTCGA TCGCGCCGAC GCCACCTTCC GCGAGGAGTG TCTCACCCTC
GAGGGCTCGC CGACCTCGCG CGTGGTCGCG CTGTGGTGTC TGTTCTATCT GGGCGACATC
GCCGAGCTGT CGCAGCGCGT GCCCACCCAA CTCTACCGCG CCGGCGAGCG CGGCGACCTG
CAGGAGCTGG TCAACATCGG CGGCGGCGTG GCGCACTACG AAGCCCTCGC CGACGACCAC
CCCGAGCGCG CGGCCAAGCT GGTCGAGAAA TACATGAGTA GCTGGCCGCT CAAGACCTTT
CACTGGCAGC ACTGGCAGGG CCTGTCGGCG CGGGTCGAGA TCGACCTCTA CCGCGGCGAC
TGGGAAGCCG CGCACGCGCG CCTCGAGCGC TCCTGGGACC GGGTGCGGCG CTCGGTCATC
CGCCACAATC ACAAGCTGCG CCAGGACACC GCGCTGCTGC GGGCGCGCTG CAACGTGGCC
GCCGCGCGCG CGGGCGAGCG CCCCGCGTCC CACCTGCAGC GAGCCGAGCG CATGGTCGAG
CGCGTGGAGC AATCCGAGAT GGCCTGGTCG GCGCCGCTGG CGCTGCTCAT TCGCGCCGCC
ATCGCCCACG TGCGCGACGA CAGCGCGCGC GCCTGCGAGC TGCTCAGCGA CGCCCAGCAG
CGCTTCGAGG CCGCCGATAT GGGACTCTAC GCCGAGCTGG CTGCGTATCG CCGCGGCCAG
CTCATCGGCA CCAGCGAGGG CCGCGCGCTC TTCGACAGCG CGCACAGGGC CATCGCCCAG
CGCGGCATCC GCCAGCCCGA GAAGATGGCC GACAGCCTGG CTCCCGGCCT GAGCCCCTGG
CAGCCCCTGC CCGCCCAGCT CCCGGCGCCC GTCACCGCAC CTGGTAATCC CCCTGGCGAG
CCGAGCGGCG ACAGCGCCCC CCTCCTCGAA GAAGGCCCCA CCGAAGTCGG CTGA
|
|---|
| Protein sequence | MNFVFTGTER FQILRQLGAG GMGVVYEALD NETNSRVALK TLRNRNGDAL VRFKREFRLL
RNLQHRNLID LKELLEERGH WFFTMELIEG CDFLSYVGRQ IHDSFDSMAS TQVQQHSGSY
PPGPITPSRF PDEFAPTACY QVDEARLRDA LIQLVCGLQV LHGAHKVHRD VKPSNCLVTD
EGRVVVLDFG LVSDLAPDND WDRERDLVGT VPYMAPEQAA SKPARPPADL YSVGVMLYEA
LTGILPFPGP PGLVAQLKQS ERPTAPSILL PQVPADLDAL CMDLLEIVPE DRPTSDQVLA
RLGYRAPIEH TPRPSSTSTF VGREDELAAL HEAAETAREH AVAVLLSGES GVGKSALIRH
FIEQSARPQR GVPALVLATG CHEREAVPFK AFDGIIDLLS SYLGRLSQDD LKEILPEHVS
LLMQVFPVLE RVRAIVNAPR KSEPRDPQEQ RFRVFGALRA LFAKLAERAP LILVIDDIQW
SDADSRALLQ ELLRAPEAPR LMLLTTLRTP WRRGATPFEV SPRVPAAIVG QSPLLPLPGE
DVRHIELQRL PPQDARALAQ ALQPSGATWS IATLERIASE SSGHPLFLDE LARHVTPGDG
TDLRSFQLEE ALWTRIAALD TGPRRLVTIV CVAARPIEQS VAAEVANLPA EELQRMMRAL
ELGKFLRARG PRLRDAVEPY HERVRLAVLA HMDEETRRAY HVAIAEALEA AEAAPEALAF
HWAEAAQMAK AASYAVTAAL EAAKALAFSR AARMYRLAID MRECLPEDTM RRLYVGLGEA
LVNDGRGDEA AEAYLEAAAL STHEAALELK RRAVEHRLRC GHIQEATPVA RELLRAVGLH
MPRSQSSAKL MLVLERARLA LRGIRFDERA ESELPRATLM KIDVCSSIAG GITTAEPYIG
AGFVARNLRL SLDAGEPYRV ARALSLQSMA ISALDPKNSA HGVRMRELAL DLAHKIKKPH
AIAVAGVAEG WSLFWRGQWK RALPALDRAD ATFREECLTL EGSPTSRVVA LWCLFYLGDI
AELSQRVPTQ LYRAGERGDL QELVNIGGGV AHYEALADDH PERAAKLVEK YMSSWPLKTF
HWQHWQGLSA RVEIDLYRGD WEAAHARLER SWDRVRRSVI RHNHKLRQDT ALLRARCNVA
AARAGERPAS HLQRAERMVE RVEQSEMAWS APLALLIRAA IAHVRDDSAR ACELLSDAQQ
RFEAADMGLY AELAAYRRGQ LIGTSEGRAL FDSAHRAIAQ RGIRQPEKMA DSLAPGLSPW
QPLPAQLPAP VTAPGNPPGE PSGDSAPLLE EGPTEVG
|
|---|
| |