Gene Hoch_4070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4070 
Symbol 
ID8546471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5591532 
End bp5593364 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content72% 
IMG OID646388747 
Productserine/threonine protein kinase 
Protein accessionYP_003268462 
Protein GI262197253 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0410842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCGG TAGTAAAAAA GGGCATCACC GTGGGCATGG TCGTGGCGGA TACCTACGAG 
ATCGTAGGCC TGCTCGGCGA GGGCGGTATG GGCTCGGTCT GGGAGGCGCG CCACACCCGC
CTCCAGGGTA AGCGCGTGGC CATCAAGGTC TTGCACGCGT TCGCCAGCGG CGACGCCGAG
GCGTTCAAAC GCTTCGAGCG CGAGGCCAAC ATCGCCACCC GCCTCAACCA TCCCAACATC
GTTCAAGTCC ACGACTTCAA CACCCTGCCG AGCGGCGAGC CGTACCTCAT CCTCGAGTAT
CTACAGGGCG AGAACCTGGC CGAGCGGCTG GAGCGCGGAC GCATGCGCAT GGCCGAGGCC
ATGCCCATCG CGCGCCAGAT CGGCTCGGCG CTGCAGGCCG CTCACGGCGA GGGGATCGTC
CACCGCGACC TCAAGCCGCA CAACATCTTC CTGTGCCCGA CCGAGACCGC CGGTTACGCC
GTCGAGCAGG TCAAGGTGCT CGACTTCGGC ATCTCCAAGA TCCGCGGCTC CAACACGGTG
CAGACCCAGA CCAGCGCGAT CCTCGGCACG CCGCAGTACA TGTCGCCGGA ACAGGCCCGC
GGCGCGCAGA GCCTGATCGA CCAGCGCACC GACGTGTTCG CGCTCGGCGC CATCGTCTAC
GAGATGCTTG CCGGCAAGCC GGCCTTCCGC GGCGACAGCA TCCCCGAGGT GCTGTTCAAG
GTTGTCTATG AGGAGCCGCA GCCGCTGGCC GAATGCGCGC CCGGCGCCAG CCCCAAGGTG
ATCGCGGCCG TGGAATCGGC GCTGCGCAAG GACCTGGACG AGCGCTGCGA GAGCGCCTCG
GCGTTCATTG AAGCGCTCAC GGGCGATCCT CTCGTCACCC TGAGCGGCGG GCCCGCGACG
GCCGCGGTCG CGACGCCGTC GGTCACTCCC TCGATGGCGG CGGCGGCTGG CGGGGCGATG
ACCGGGCTGG CCCCGGGCAA CGCCGCGTCC GTCGGCCGCG AGGGCCAGGA GCGCGCGCCG
ACGCCGGCCT TCGACCCCAC GCTCGCCCCC AACGCTCTCG GCCTCGCGGC GACCGGCGCG
CTGCAGGGAG CAGCCGCCGG GGCCACGGGC TCCGCGGGGG CCGGGGTGCC CAACACCGCC
CCCCCGCTCT CAGCCCGTCA ACAGCCCGCC GTCGCCGGAA CCGGCGGCGC AGGCACGCAC
GCGTCCCAGA ACCAGGTCGC CCCCGGCGCT GCCGCGGCCT CGGTCGACAC CGCGGTGCCA
GCGCGCAAGC GCGGCGTCCT GGCCTGGCTC GTGGGCGGCG CGCTGCTGCT CGGCGTCGCC
GCCGCCGCCG CCGTGATCAT CGATGGCAGC GGGAACGAAG TCGTCCACCC GTCCGAGCTC
GACGCGGGCG CCGCCGATGC AGCCACCGAG CTCGCCGCGG AAACCGAGCC CGCCGACGCC
GGCACCGGCG CCATCGCGGA GACCGAGCCC GCCGACGCCG CGGTCGCGGG CGATGTCGTC
GCCGCGGCCG CCGATGCCGC CCCGCGCCCC GTCAAAGACC CGCCGACGCC GACGACGGCG
CGGCCCCGTG GCGAACGGCT CTCGCCCGCG CAGCGCAAGC GCCTGGACGA GGCCGCCGCG
CTCATCGAGT CCAAGCCCGA TGTCGCCATC CGCCGCGCCC AGGCCACCTT TCAAGACGGC
GCCAGCGAGC GCGCCTACGA GATCATGACC CGCGCATACT GCGTGAAACG CGACCTCGGC
AACGCCAAAG GCGTGTTCCG CAACGTCAAG ACGGCGCGGG TCCGGCTGCG CACGCGCAAC
TTCTGCCGCC GCCACCTGAC CGGCTTCGAC TAG
 
Protein sequence
MVAVVKKGIT VGMVVADTYE IVGLLGEGGM GSVWEARHTR LQGKRVAIKV LHAFASGDAE 
AFKRFEREAN IATRLNHPNI VQVHDFNTLP SGEPYLILEY LQGENLAERL ERGRMRMAEA
MPIARQIGSA LQAAHGEGIV HRDLKPHNIF LCPTETAGYA VEQVKVLDFG ISKIRGSNTV
QTQTSAILGT PQYMSPEQAR GAQSLIDQRT DVFALGAIVY EMLAGKPAFR GDSIPEVLFK
VVYEEPQPLA ECAPGASPKV IAAVESALRK DLDERCESAS AFIEALTGDP LVTLSGGPAT
AAVATPSVTP SMAAAAGGAM TGLAPGNAAS VGREGQERAP TPAFDPTLAP NALGLAATGA
LQGAAAGATG SAGAGVPNTA PPLSARQQPA VAGTGGAGTH ASQNQVAPGA AAASVDTAVP
ARKRGVLAWL VGGALLLGVA AAAAVIIDGS GNEVVHPSEL DAGAADAATE LAAETEPADA
GTGAIAETEP ADAAVAGDVV AAAADAAPRP VKDPPTPTTA RPRGERLSPA QRKRLDEAAA
LIESKPDVAI RRAQATFQDG ASERAYEIMT RAYCVKRDLG NAKGVFRNVK TARVRLRTRN
FCRRHLTGFD