Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4055 |
Symbol | |
ID | 8546456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5566152 |
End bp | 5566949 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646388732 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003268447 |
Protein GI | 262197238 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.14003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.288742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCGC TTACCGACGA GCACGCGCAG CGCTTTCGCG ACCACGGCTA CTTCGTGTTG CCCGGGGCGC TGTCCGCCGA CGATCTGGCG CTGCTGCGCG CCGCCTGCGC CTGGGCCGTG GGCGTGGTCG ATGCCGCCAT GGACGCCGCC GGCAGCGAGC GCCTGGGGCT ATCGCTGCGC GACCGGCGCT ACATCGTGCC GCTGCAGCAC AAGCGCCACC CGCGGCTGCC GGGCTTCCTC TACAGCCCGC TCATGGTGGC CCTGTGTCGC CTCGCCCTGG GCCGCGACGC CTACCTCTTC CTCGAGCAGT TCGTGGTCAA GGGCGCGGGC GACGGCGCCG CGCTGCCCTG GCACCAGGAC GCCGGCTACC TGCCGTTTTC GTCGCCCCCG TACATCACCG TGTGGATCCC GCTCGACGAC GTCGACCAGG ACAACGGCAC CCTGGCGCTC TTGCCCTACG GCCGCGCCGG AACGCGCGAG CGCGTGGACC ATCGCCTCGA CCCGGCCACC GGCGAGCGCA TCGGCTACGA CGGCGACGAC CCGGGCGAGC TGGTGTGCGC GCCCGCCGGC AGCGTCGTGC TCATGTCCTC CACGCTGCTG CACCGCAGCG GGCCCAACCG CAGCGCGCGG CCGCGCCGCG CCTTCCTGGC GCAGTACTCG GCCGCGCCCA TCCTCGCGCC CGACGGCTCG GTGCGCCACT TCGCCGACCC GGTGCTGCGC GCCGGCCGCG CCCAGCCGCC CCCCACCGCC GCGGCCTGCG CCCAGGCGCC CGCCATGCCC CTGTTCTGGA GCGACTGA
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Protein sequence | MQSLTDEHAQ RFRDHGYFVL PGALSADDLA LLRAACAWAV GVVDAAMDAA GSERLGLSLR DRRYIVPLQH KRHPRLPGFL YSPLMVALCR LALGRDAYLF LEQFVVKGAG DGAALPWHQD AGYLPFSSPP YITVWIPLDD VDQDNGTLAL LPYGRAGTRE RVDHRLDPAT GERIGYDGDD PGELVCAPAG SVVLMSSTLL HRSGPNRSAR PRRAFLAQYS AAPILAPDGS VRHFADPVLR AGRAQPPPTA AACAQAPAMP LFWSD
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