Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4020 |
Symbol | |
ID | 8546416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5521002 |
End bp | 5521571 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646388692 |
Product | NusG antitermination factor |
Protein accession | YP_003268412 |
Protein GI | 262197203 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.579663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.523412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCGG AGTCCGAAGG TAAAGAAGAG AAGGTCCAGA ACGACAAGTT CAAGTGGTAC GTGGTGCACA CGCACGCCGG CTACGAGCAG CGCGTTCGCG AGACGCTGCA ACAACGTGCC GTGGCGCTGG GGTTCAAGGA CAACATCGGA GAGATCCTTG TCCCGACGCT CAACGTCATG GAGGTGGTGA AGGGGAAGCG CAAGACTTCG ACCAAGAAGT TCTTCCCCGG CTACATCTTC GTGCAGATGG AATTCACCGA CAGCGTGTAT CACCTGATTC GAAACACGCC CAAGGTGACC GGCTTCGTCG GCGGTAACAC CCCGCAGCCG GTGCCCGAGA GTGAGATCTC GGTCATCCAC AACACCATGA GCGACAATCA CTCGAAGCCG CGGCCGAAAG TGATGTTCGA GCAGGGCGAC AACGTCCGCG TCACCGATGG ACCGTTCGCC AGCTTCACGG CCACGGTGGA AGAGGTGAAG CCCGACAAGC AGAAGCTGCG CGTTTTGGTG ACGATTTTCG GTCGCGCCAC GCCGGTTGAG CTTGACTTCA CCCAGGTCGA GAAAGCATAA
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Protein sequence | MSSESEGKEE KVQNDKFKWY VVHTHAGYEQ RVRETLQQRA VALGFKDNIG EILVPTLNVM EVVKGKRKTS TKKFFPGYIF VQMEFTDSVY HLIRNTPKVT GFVGGNTPQP VPESEISVIH NTMSDNHSKP RPKVMFEQGD NVRVTDGPFA SFTATVEEVK PDKQKLRVLV TIFGRATPVE LDFTQVEKA
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