Gene Hoch_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4020 
Symbol 
ID8546416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5521002 
End bp5521571 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID646388692 
ProductNusG antitermination factor 
Protein accessionYP_003268412 
Protein GI262197203 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.579663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.523412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGG AGTCCGAAGG TAAAGAAGAG AAGGTCCAGA ACGACAAGTT CAAGTGGTAC 
GTGGTGCACA CGCACGCCGG CTACGAGCAG CGCGTTCGCG AGACGCTGCA ACAACGTGCC
GTGGCGCTGG GGTTCAAGGA CAACATCGGA GAGATCCTTG TCCCGACGCT CAACGTCATG
GAGGTGGTGA AGGGGAAGCG CAAGACTTCG ACCAAGAAGT TCTTCCCCGG CTACATCTTC
GTGCAGATGG AATTCACCGA CAGCGTGTAT CACCTGATTC GAAACACGCC CAAGGTGACC
GGCTTCGTCG GCGGTAACAC CCCGCAGCCG GTGCCCGAGA GTGAGATCTC GGTCATCCAC
AACACCATGA GCGACAATCA CTCGAAGCCG CGGCCGAAAG TGATGTTCGA GCAGGGCGAC
AACGTCCGCG TCACCGATGG ACCGTTCGCC AGCTTCACGG CCACGGTGGA AGAGGTGAAG
CCCGACAAGC AGAAGCTGCG CGTTTTGGTG ACGATTTTCG GTCGCGCCAC GCCGGTTGAG
CTTGACTTCA CCCAGGTCGA GAAAGCATAA
 
Protein sequence
MSSESEGKEE KVQNDKFKWY VVHTHAGYEQ RVRETLQQRA VALGFKDNIG EILVPTLNVM 
EVVKGKRKTS TKKFFPGYIF VQMEFTDSVY HLIRNTPKVT GFVGGNTPQP VPESEISVIH
NTMSDNHSKP RPKVMFEQGD NVRVTDGPFA SFTATVEEVK PDKQKLRVLV TIFGRATPVE
LDFTQVEKA