Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3993 |
Symbol | |
ID | 8546389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5491735 |
End bp | 5492406 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646388665 |
Product | ribosomal protein L5 |
Protein accession | YP_003268385 |
Protein GI | 262197176 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.13137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.956876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG GTGCCGATAA ACAGCAAGGC AAGGGCGGCC AGAAGGCGTC CAAGAACGCT TCGGCCCAGG CCGAGCCGTT CCAGAAGTAC ACGCGCGAGG CGCCTCCGCG GCTCAAACGC CGCTACGACG AAGAGGTTCG CGCCAAGCTC AAGGACGAGT TTGGCTTCTC TTCGGTGATG CAGGTCCCCA AGATCGAGAA GATCACCATC AACATGGGCC TCGGTCGCGC CAACCAGAAT CCCAAGATTC TCGAGAGCGC CGTCGAGGAG CTGCGGGCGA TCTCCGGCCA GGCGCCGGTG GTCACCGCCG CGCGCCGCGA CATCGCGACC TTCAAGCTCC GCCGCGGCCA CAAGATCGGT GTGATGGTGA CCCTGCGCCG CGAGCGCATG TGGGAGTTCC TCGACCGTCT GATCAGCGTG GCGCTGCCGC GCGTCCGCGA CTTCCGCGGG ATCTCGCCGA AGGCCTTCGA CGGCCGCGGC AACTACTCGC TCGGCGTTCG CGAGCAGATC ATCTTCCCGG AGATCGAATA CGACAAGATC GACTCGGTGA AGGGCCTCAA TATCACCATC GTGACCTCGG CGAAGAGCGA TGAAGAAGGT CGCGCCCTGC TTCGGCATAT GGGCATGCCC TTCCGCACCC CGTCGTCCGC AGCACAAGGA GTCGCAGCAT GA
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Protein sequence | MAKGADKQQG KGGQKASKNA SAQAEPFQKY TREAPPRLKR RYDEEVRAKL KDEFGFSSVM QVPKIEKITI NMGLGRANQN PKILESAVEE LRAISGQAPV VTAARRDIAT FKLRRGHKIG VMVTLRRERM WEFLDRLISV ALPRVRDFRG ISPKAFDGRG NYSLGVREQI IFPEIEYDKI DSVKGLNITI VTSAKSDEEG RALLRHMGMP FRTPSSAAQG VAA
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