| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3862 |
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| Symbol | |
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| ID | 8546257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5314005 |
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| End bp | 5315759 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388533 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_003268254 |
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| Protein GI | 262197045 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.7101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0492158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTAT CCTGGGCCTT CATTCCCACG CTCAAGGAGA GCCCCGCCGA CGCACAGGTG
GTTAGCCACG TGTACATGGT GCGGGGCGGA TACATGCGCC GACTGGCGGC AGGGGTGTAC
ACCTTCTTGC CGCTGGGTTG GCGCGTGATC CGGAAAATCG AGAACATCGT CCGCGAGGAG
ATGGACGCCG CCGGTGCCCA GGAGGTGCTG ATGCCGGCCG CCATCCCGGG CGAGCTGTGG
CAGGAGAGCG GCCGCTGGAG CAAGTACGGC CCCGAGCTCT TGCGCTTCCA GGACCGCAAG
GGCGCCGACT TCTGCTTCGG CCCGACCCAC GAGGAGGTCG TGGTCGACAT GGTCCGGCGC
GACACCAAGT CGTACCGCGA GCTGCCGCTC ACGCTGTATC AGATCCAGAG CAAGTTCCGC
GACGAGCTGC GGCCCCGCGC CGGCCTGATG CGCGGCCGCG AGTTCATCAT GAAAGACGCC
TACTCCTTCG ATGTCTCGGA GGAGGCGGCC ATGCACAGCT ACACCGGCAT GTACCAGGCC
TACGAGCGCA TCTTCCGCCG CTGCGGCCTG GACTTCCGCC CGGTGGAGGC CGACACCGGC
GCCATCGGCG GCTCGCGCTC GCACGAGTTC CAGGTGCTGG CCGAGTCGGG CGAGGACGCG
ATCGTGTCCT GCGACGCGTG CGAGTACGCG GCCAACGTCG AGGAGGCCAA GGTGCCGGCC
CCGTCCGAGC CCGGCATCGT CCATCAGGGC GAGGGCGAGG CGACGCTGAG CAAGGTGGCC
ACGCCGGGGA CCAAGACCAT CGAGCAGGTG ACCAAGTTTT TGGGCGTGGA AGCCGAGCAG
GTGATCAAGA CCCTGGTGTA CATGGCCGAC GACAAGCCGC TGCTGGCCCT GGTGCGCGGC
GATCGCAGCC TCAACGAGAT CGCGCTGAAA AAGGCCACGG GCGCCACGCA GCTCTTTCTG
GCGCGCGAGG GCCAGGTCAA GGAGGCGCTC GGCACGGTGC CCGGCTTCGC CGGCCCGGTG
TGCGTCGACG CCGGCCTGCC GATCTACGCC GACGACGAGC TGCGCGGGGC CACCGGCGCG
GTGTGCGGCG CCAACGAGCT CGACGCGCAC TACACCGGCG TCGACCTCGG CCGCGATCTC
ACCGCCGAGC CGCGCTTTTT GCAGCTCCGC ATGGCGGTCG CCGGCGATCG CTGCCCGCGC
TGCGACAGCG GTCGTCTGCG CGCCCACCGC GGCATCGAAG TCGGACACGT GTTCTATCTC
GGCACCACCT ACAGCGCGCC CATGGGCTGC ACCTTCCTCG ACGAGGCGGG CCAGGAGACG
GCCATGGAGA TGGGCTGCTA CGGCATCGGC ATCACGCGCA TCGCGGCCGC CGCCATCGAG
CAGAACCACG ACGAGGGCGG CATCGTCTGG CCGCTGTCGA TCGCGCCCTA CGAGGTGGCG
ATCCTGCCGC TGCAGATGAA GGACGAGGAC GTGGCCGCGG CCGGCGAGAC CCTGTACGCC
AAGCTCAAGG AGTGCGGCAT CGAGGTGCTG CTCGACGATC GCGCCGAGCG TCCGGGCGCC
AAGTTCAAGG ACGCCGACCT CATCGGCATC CCGCTGCGCG TGGCCATCGG CAAGCGCTCG
CTCGACGACG GCAAGGTCGA GGTCAAGTGG CGCAAGGGCG GCGACGCCGA GCTGGTGCCG
GTGGCCGACG CGGTCGAGCA CGTGGCCGGC CTCATCCGGG CCGAGCGCGA GCGCCTGGGC
CAAGACGGGG CGTGA
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| Protein sequence | MRLSWAFIPT LKESPADAQV VSHVYMVRGG YMRRLAAGVY TFLPLGWRVI RKIENIVREE
MDAAGAQEVL MPAAIPGELW QESGRWSKYG PELLRFQDRK GADFCFGPTH EEVVVDMVRR
DTKSYRELPL TLYQIQSKFR DELRPRAGLM RGREFIMKDA YSFDVSEEAA MHSYTGMYQA
YERIFRRCGL DFRPVEADTG AIGGSRSHEF QVLAESGEDA IVSCDACEYA ANVEEAKVPA
PSEPGIVHQG EGEATLSKVA TPGTKTIEQV TKFLGVEAEQ VIKTLVYMAD DKPLLALVRG
DRSLNEIALK KATGATQLFL AREGQVKEAL GTVPGFAGPV CVDAGLPIYA DDELRGATGA
VCGANELDAH YTGVDLGRDL TAEPRFLQLR MAVAGDRCPR CDSGRLRAHR GIEVGHVFYL
GTTYSAPMGC TFLDEAGQET AMEMGCYGIG ITRIAAAAIE QNHDEGGIVW PLSIAPYEVA
ILPLQMKDED VAAAGETLYA KLKECGIEVL LDDRAERPGA KFKDADLIGI PLRVAIGKRS
LDDGKVEVKW RKGGDAELVP VADAVEHVAG LIRAERERLG QDGA
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