| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3861 |
|---|
| Symbol | |
|---|
| ID | 8546256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5313259 |
|---|
| End bp | 5314008 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 646388532 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_003268253 |
|---|
| Protein GI | 262197044 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.774013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0672565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTGG CCGACGCGAG CAGCGGCCGC GGCCAGGTGT TCGAGCCCGG CAGCCGCCTG
ATCACGGCCA TCGACGTTCC CGACCAGGCG TCCGCCGACG CGCTGGTGGC GCGTCTGGGC
GAGGCCGATT GGCTCAAGAT CGGCCTCGAG CTGTTCATCG CCGGCGGGCC CGAGCTGGTG
CGCGGCTTCG TGTCCCGCGG CTACCGCGTG ATGCTCGATC TCAAGCTGCA CGACATCCCG
GCCACGGTGG CGCGGGCCAC GGCGCGCGCG GCCGCGCTCG GGGTCGAGCT GCTCACGCTG
CACGCCTCGG GCGGTCGCGA GATGTTGGCG GCCGCGGTCC AGGCCGCCCG CGAAGCCCAG
GCGGCCGCGC CGCAGCGCGC GCCCATGCGC CTGCTGGCGG TCACGCTGCT CACCTCGCTG
GGCGATGGCG ACCTCGACGC CGTCGGTCTC ATCGGCCCGG CCGAGGCGCT GGTGGCGCGG
CAGACGGCCA TGGCCGTGGC CAGCGGCTGC GACGGCGTGG TGGCGTCGCC GCGCGAGGTC
GCCCGGCTGC GCGAGGCCGT GCCCGAGCGC TTCCTCATCG TCACGCCCGG CATCCGCCTG
GCGAGCGCGA GCGCCGATGA CCAGAAGCGC ACCAGCACGC CGGCCGAGGC GCGGGCGGCC
GGCGCCGATC TGCTGGTGTG CGGTCGGCCC ATCCGCGACG CCCGGGATCC CGTGGCCGTG
GCCGACGCCA TCCGCGCGCA GATCGCCTGA
|
|---|
| Protein sequence | MSVADASSGR GQVFEPGSRL ITAIDVPDQA SADALVARLG EADWLKIGLE LFIAGGPELV
RGFVSRGYRV MLDLKLHDIP ATVARATARA AALGVELLTL HASGGREMLA AAVQAAREAQ
AAAPQRAPMR LLAVTLLTSL GDGDLDAVGL IGPAEALVAR QTAMAVASGC DGVVASPREV
ARLREAVPER FLIVTPGIRL ASASADDQKR TSTPAEARAA GADLLVCGRP IRDARDPVAV
ADAIRAQIA
|
|---|
| |