Gene Hoch_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3860 
Symbol 
ID8546255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5311989 
End bp5313026 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content70% 
IMG OID646388531 
Producthypothetical protein 
Protein accessionYP_003268252 
Protein GI262197043 
COG category[R] General function prediction only 
COG ID[COG1106] Predicted ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.925149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.074002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGT CGCTGGAAAT TCGCGGCTTT CGTTGCTTTC GAGAGCTCTC GATTGCTCCG 
CTCGGCCGCA TCAACCTCAT CGTGGGCAAT AACGGCGTCG GCAAGACCGC GCTGCTTGAG
GCCCTGCGTC TGCATGCGGC CCAGGGCGAG GCGCTGGCCG AGCTGTGGCG CATCCTCGAG
ACCCGCTCGG AGTTCGCCAT GATGCGGGCG TCGCAGGAGC GCCACCGGCA GGTCGTGGAC
TGGCCGCGCG CGTTCTACGA ACCCCACGTG CACACCCACG AGGCCTCGAT TTCGGTGGGC
TCGCGCGTCG GCGCGCGCGA CTCGGTGCAG CTCCAGCTCG AGCTCAGCTC GCTGGCGCTG
CTGGGCGCGC GCGGCTGGAT GGGGCTGTCG ATCGGCGGCG CCAGCGTGAG CATCTCGCTG
GAGACCGCCG ATCTCGCGCA TCCGCTGGCC GCGCCGCCGC GCGCGTGCAT GTACCTCGAC
CACAACGGGC TGAGCGCCGA GGACTGCGTG CGCATCTGGG AGGCGCTGCC GCGCGACGAG
CGCAGCGCGC TCATCCTGCC GGCGCTGCGC CTGGTGGCGC CCGACATCCA CAAGATCAAG
ATGGGCGAGA TCCCGGGGCC GGCCGGCCAC GGCGCGCGCG TGCCCCAGGT GACGCGCGGC
TCGCATCCCG GCTCCGAGCC GCTGCACGGC CTGGGCAGCG GCGCCAAGCG CCTGTTCGAT
ATCGCGCTGG GGCTCACCTG CGCGCGCGGC GGCGTGTTTC TGCTCGACGA GTTCGAGAAC
AGCCTGCACC CCAGCGTGCA GCCGCTGTTG TGGCGCTATC TCTTCGATGT GGCGCTGGCC
GACGACGTCC AGGTGTTCGT GACCACGCAT AGCTGGGACT GCATCCACAG CTTCTACGCC
GCCGGTATCG ATCATCCAGG CGTCGGCGCG GTGCTGCGCC TCGAGCGCGG CGAGGGCGCG
TTCAGCGACG TCCACGTCGA GCACTTCAGC GACAGCGACG TGGCCGTGTT CATGGAACAG
GCCATCGATC TGCGCTGA
 
Protein sequence
MLPSLEIRGF RCFRELSIAP LGRINLIVGN NGVGKTALLE ALRLHAAQGE ALAELWRILE 
TRSEFAMMRA SQERHRQVVD WPRAFYEPHV HTHEASISVG SRVGARDSVQ LQLELSSLAL
LGARGWMGLS IGGASVSISL ETADLAHPLA APPRACMYLD HNGLSAEDCV RIWEALPRDE
RSALILPALR LVAPDIHKIK MGEIPGPAGH GARVPQVTRG SHPGSEPLHG LGSGAKRLFD
IALGLTCARG GVFLLDEFEN SLHPSVQPLL WRYLFDVALA DDVQVFVTTH SWDCIHSFYA
AGIDHPGVGA VLRLERGEGA FSDVHVEHFS DSDVAVFMEQ AIDLR