| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3850 |
|---|
| Symbol | |
|---|
| ID | 8546243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5300701 |
|---|
| End bp | 5301780 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646388519 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003268242 |
|---|
| Protein GI | 262197033 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0639053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.226481 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGGA ATATCTCGCG CGCTGGACTC ACTCTCTCCG CTGCCCTGCT GTGTGCCTGC
GGTGGCAGCG ACGATCCCGG GCCACCCGAC GCCATGCCGG TGGAACCCGA CGCCATGCCG
ATCCCGGACG CCATGCCGAT CCCGGACGCG GCGACCATGC CGGAGACGCT GCGCGAGACC
GGCCTGTACG CCGGTCCCGA GGGCGAGGAG CTGGCCCCCG GGGTGCGCGC CTACGTGCCG
AGCTACGAGC TGTGGGCCGA CGGCGCCAGC AAGGAGCGCT GGGTGTATCT GCCGCCGGGC
TCCAAGATCG ACACCTCGGA CATGGACGCC TGGGAGTACC CGGTGGGCAC GCGGCTGTGG
AAGGAGTTCT CGCGCGACGG CACGCGCCTC GAGACCCGCC TGCTGTACAA GGTCCGCGCC
GGCAGCGGCC CGAGTAGCTG GTTCGTGGGT ACCTTTGCCT GGGACGAGGA GCAGACCGAC
GCGCGCCTGG TGCGCAACGG CGTGACCGAC GCCCTGGGCA CCGACCACGA CATCCCGCTG
TTTTTGGAGT GCCAGCAGTG CCACTCCACG GTCTCCGATG TGGTGCTGGG CTTCTCGGCC
GTGCTCCTCG ACCACGACAG CGAGGGCGTG GACCTGGGCG ATCTCATCGC CGAGGGCGCG
CTCACGGCGC CGCCCGCGGG CAGCGGGCCG GTGTACTTCC CGCTGCCGGG CGACGACGCC
ACGCAGCAGG CGCTGGGCTA CATGCACGCC AACTGCGGAG GCTGCCACAA CCCCGAGTCG
CCGGTGTTCA CCTCGGGCGA CGCGCTGCAG AACCTGCGCC TCGACACCGC CGCGCTGGGC
TCGGTGGACA CCGTGCCGGC GTTCGCGAGC ACGCGCTGCC AGGAGATGCA GAAGCCGGTG
GTCGGCGCCG ACGCGATCCT GGTGCCGGGT AGCCCGGAGA CCAGCGCCAT CACCGTGCGC
ATGGGCAAGC GCGACGGCGA CGAGCAGATG CCCCAGATCG CCACCGACCA GATCGATGCC
ACCGGCCTGG CCGCGGTCGA GGCCTGGATC CGCTCGCTGC CGGCGGAGAC CTGTCCGTAA
|
|---|
| Protein sequence | MRRNISRAGL TLSAALLCAC GGSDDPGPPD AMPVEPDAMP IPDAMPIPDA ATMPETLRET
GLYAGPEGEE LAPGVRAYVP SYELWADGAS KERWVYLPPG SKIDTSDMDA WEYPVGTRLW
KEFSRDGTRL ETRLLYKVRA GSGPSSWFVG TFAWDEEQTD ARLVRNGVTD ALGTDHDIPL
FLECQQCHST VSDVVLGFSA VLLDHDSEGV DLGDLIAEGA LTAPPAGSGP VYFPLPGDDA
TQQALGYMHA NCGGCHNPES PVFTSGDALQ NLRLDTAALG SVDTVPAFAS TRCQEMQKPV
VGADAILVPG SPETSAITVR MGKRDGDEQM PQIATDQIDA TGLAAVEAWI RSLPAETCP
|
|---|
| |