Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3831 |
Symbol | |
ID | 8546224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 5279753 |
End bp | 5281060 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646388500 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_003268223 |
Protein GI | 262197014 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0387698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACTCT CCTTCGCGGC GGCGACGGAC GTCGGCAAAC AGCGCGACCA CAACGAGGAT AATTTCCTCA TCGACAAGCG CCTGCGCTTG TTCGTGGTCG CCGACGGCAT GGGCGGTCAC GCCGGCGGCG AGGTCGCCTC GTCCATCGCG GTCCACGAGA TCCGCGACGC GGTGTACGAA AACCGCGATG TGCTCGAGCG CTTCCGCAAC GACGAGTCGG GCACCGACGC GGTCGAGATC CTGCAGATCC TCGAGCACGC CATCCAGACC GCGTGCGCCT CGGTGCACAG CCAGGCCCAG GCCGACGCCA GCAAGCGCGG CATGGGCACC ACGGCCTCGG TGTTGCTGAT CGCGGGGCCG CCGACGCACC TGCGCGGCTT CATCGCCCAC GTCGGCGACA GCCGCATCTA CCTGGCGCGC CAGAGCCAGT GCCACCAGCT CACCGAGGAT CACTCGCTGG TCAACGAGCT CATCCGCCGC GGCAAGCTCA AGCGCGGGGA GCTCGACAGC TCGCCCTACA AGCAATACAA GAACGCGGTC ACCCGCGCGG TCGGCATCTA TCCCTCGGTC GAGGTCGACA CCTTCGACTT CGACATCCTG CCCGGCGATC GCCTGCTGAT CTGCTCCGAC GGCCTGTACG GCTACCTCGA TGAGGAGCAG CTCCCCAAGC AGCTCACCAG CGGCGACGTC AAAGAGGTCC CGAGCCGGCT CATCGACATC GCCAACAACG GCGGCGGCCA CGACAACATC ACCGGCGTGG TCATCCGCGT GGGCGAGAGC CCGGCGCACG AGGTCGGCCA GCGCGCCCAG GAGCTGTCGC TCAAGCTCGA AGTGCTCAAG AGCATGCGGA TGTTCCGCTA CCTGAGCTAC AAGGAGCTGG TCCGGGTCAT GAACATCACC GAGACCCGCG GCTTCGCCAA CGAGGAGGCC ATCTTCCGCG AGGGCGACCC GGGCGACGCC ATGTTCGTGG TGCTCTCGGG CACGGTGCGG CTGTTCAAGG CCGACGTGCC GGTGGCGCTG ATGAAGCGCG GCCACCACTT CGGCGAGATG TCGCTGGTCG ACCGCTCGGT GCGCTCGCTC ACGGCCGTGG CCGAGGAGGA GAGCCGGCTG ATCGCCATCC CGCGGCAGAG CTTCTACAGC ATCGTCAAGA AGGAGCCGGC GCTGGCGGTC AAGATCCTGT GGAGCTTCGT GCAGGTGCTC GGCAACCGCC TGCGCAAGAC CACGGCCGAC CTCTCCGACG CTCTGCACCA TCAGGCCGAG CGCCCGGGCA GCGACGGCGG CAAACCCGAC GAGCCCTTCC CGGGCTGA
|
Protein sequence | MELSFAAATD VGKQRDHNED NFLIDKRLRL FVVADGMGGH AGGEVASSIA VHEIRDAVYE NRDVLERFRN DESGTDAVEI LQILEHAIQT ACASVHSQAQ ADASKRGMGT TASVLLIAGP PTHLRGFIAH VGDSRIYLAR QSQCHQLTED HSLVNELIRR GKLKRGELDS SPYKQYKNAV TRAVGIYPSV EVDTFDFDIL PGDRLLICSD GLYGYLDEEQ LPKQLTSGDV KEVPSRLIDI ANNGGGHDNI TGVVIRVGES PAHEVGQRAQ ELSLKLEVLK SMRMFRYLSY KELVRVMNIT ETRGFANEEA IFREGDPGDA MFVVLSGTVR LFKADVPVAL MKRGHHFGEM SLVDRSVRSL TAVAEEESRL IAIPRQSFYS IVKKEPALAV KILWSFVQVL GNRLRKTTAD LSDALHHQAE RPGSDGGKPD EPFPG
|
| |