Gene Hoch_3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3824 
Symbol 
ID8546217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5269334 
End bp5270101 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID646388494 
ProductFHA domain containing protein 
Protein accessionYP_003268217 
Protein GI262197008 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.642666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0327459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGGC AGCAAGGTCC CCCACTGAAC GCCTGGCCAA CCTCCGTGAG CGGTTCACGA 
AGCACGTCGC CGAGGCGAGA CGTCTTTTCG AGCGCCGGAG CCGGTGCGCG AACGCGGCAG
AGCCAAACCC TACAGGTCGC TTGTCGAGCG GAGACCTTCA GAGTGCGTTT TGGCTTGAGC
TCGACTTCGA CATGCCCTCA GAATGGCTCT ATGCATCAGA TGCGCGAGGA CATACCATCG
GTGACACAGG GCTCCCCGTA CGTGCCGGAG CCCGGACGGC CGGCGCCCCA GCCTGCCAGG
TTGCGCGTGG TGGGGACGCG GCGATTCCTG AGCCTCCAAG ACACCGCCCA AACGGATGCC
GCGACAGGCT TCAGCATCGG CCGAGATAGC GCTTGCGATT TGCAGCTCGA TGACGAATCT
GTCTCCTCGT TTCACTGCAA CGTGACGGTG GTGCAAGGAG CGTTCATTCT CCGTGACGCC
GGTTCGAAGA ATGGCGTGTG GCTGAGCTGC AAAGGGTTGA AGGGCCCCTT CCATCGAGTC
TATGAAGTCC GCCTCGAGTT TGGTCATTAC GTGCGCATCG GTGGTGTCAC GCTGACGGTC
GCGGATGAAC GAGGGAACTG CATGCTCGCG GCGCGCACGG AGCGCCAGTT CTTCCGCCAG
GCAGGAGCCG TGTATGGCTC GAAGCGCGAA GCTGCTCGTG CGATCGGTAT TGGTCTGCGT
GACGTGCCGC GCTTTCTCGC GGCATTCGTT GGCAGGCGCC CAAGCTAG
 
Protein sequence
MARQQGPPLN AWPTSVSGSR STSPRRDVFS SAGAGARTRQ SQTLQVACRA ETFRVRFGLS 
STSTCPQNGS MHQMREDIPS VTQGSPYVPE PGRPAPQPAR LRVVGTRRFL SLQDTAQTDA
ATGFSIGRDS ACDLQLDDES VSSFHCNVTV VQGAFILRDA GSKNGVWLSC KGLKGPFHRV
YEVRLEFGHY VRIGGVTLTV ADERGNCMLA ARTERQFFRQ AGAVYGSKRE AARAIGIGLR
DVPRFLAAFV GRRPS