Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3780 |
Symbol | |
ID | 8546173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5191717 |
End bp | 5192607 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646388450 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_003268173 |
Protein GI | 262196964 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.963902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.273576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGG CAAACGAGAT CAAGCTGCTC GGCGTAGTCG GCGCCGGCCA GATGGGGCGC GGTATCGCTC AGGTGGCGGC GCTCGCCGGC ATCGAGGTGC TCATCCTCGA TGAGAACGCC GAGCTGGCGC AGGCCGCGAT CAACAAGATC GACAACACGA TGGTCAAGCT GGTCGACAAG GGCAAGCTCG ACGCCTCGGC GCACGAGAGC GCGGTCGGCC GGCTGGCGGC CGCGGCGGCG ATCAAGCCGC TGAGCCGCTG CGACATGATC ATCGAGGCGG TGCCCGAGGA CCTCGCGATC AAGCGCGAGC TGTTCACCAA GCTCGACCGC GACACCGGCG CCATCCTGGC GACCAACACC TCGTCGATCT CGATCACCAA GATCGCGGCG ATGACCTCGC GGCCGCAGCA GGTGATCGGC ATGCACTTCA TGAACCCGGT GCCGCGGATG AAGCTGGTCG AGGTGATCCG CGGCTTGGCC ACCGACGACG CGACCTACGC GACCACCATG GCGCTGGCCA AGAAGCTGGG CAAGACCACG GTGACTTCGC GCGACGTGCC CGGCTTCATC GTCAACCGCA TCCTCATCCC GCTGCTCAAC GAGGCCTGCT TCGCGCTCTA CGAGGGCCTG GGCACGGCGG CCGACATCGA CACCGGCGTC GAGCTGGGGC TCAATCACCC GATGGGGCCG CTCACGCTGG CCGACTTCAT CGGCCTCGAC ACCTGTCTGT CGATCGCCGA GGTGCTGCAC GGCGAGCTGG GCGATCCCAA GTACCGGCCG TGCCCGCTGC TGCGGCAGTA CGTGGACGCC GGCTGGCTCG GCCGCAAGAG CGGTCGCGGC TTCTACCGCT ACGACGAGGC GGGCAAGAAG CTCGCCGACG GCGCCGCCTA G
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Protein sequence | MAEANEIKLL GVVGAGQMGR GIAQVAALAG IEVLILDENA ELAQAAINKI DNTMVKLVDK GKLDASAHES AVGRLAAAAA IKPLSRCDMI IEAVPEDLAI KRELFTKLDR DTGAILATNT SSISITKIAA MTSRPQQVIG MHFMNPVPRM KLVEVIRGLA TDDATYATTM ALAKKLGKTT VTSRDVPGFI VNRILIPLLN EACFALYEGL GTAADIDTGV ELGLNHPMGP LTLADFIGLD TCLSIAEVLH GELGDPKYRP CPLLRQYVDA GWLGRKSGRG FYRYDEAGKK LADGAA
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