Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3686 |
Symbol | |
ID | 8546076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5071701 |
End bp | 5072405 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646388354 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003268080 |
Protein GI | 262196871 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.204283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00350774 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGCTGT CCGTGCTCAT TCCCGCCTAT CAGGAGGAAG AGTCGATCGC CGAAGTCTTG CGCCGCGTGC TGGCTATCGA CACAGCAGCG CTCGGCTTCG ACAAGCAAGT CATCGTCTGC GACGATGGCT CGCGCGATCG CACCGCCGAG ATCGTCGCCG AGATCGCGGC CGCGGACCCG CGCGTGCGCC TGGTGCGGCA CCCGGAGAAC CGCGGCAAAG GCGCCGCCAT CCGCAGCGCG CTGGCCGAGG CGCAGGGCGA CTACAGCCTC ATCCAGGACG CCGACCTCGA GTACGAGGTC AGCGACTACC CGGCCATCCT GCGGCCGCTC GGCGACGGCG CCGACGTGGT CTACGGCTCG CGCTTCCTCA CCCGCTCTCG GCCCACGGGC ATGCGCCTGC CCAACTTCGT CGCCAACCGC ATCCTCACCA CCACCGCCAA CCTGCTCTTC GGGCTCTCGA TCACGGACGA GGCCACCTGC TTCAAGGCCT TCCGCACCGA GCTGTTGCGC GACCTCGCGC TCGCCTGCGA AGGCTTCGAG TTCTGCCCCG AGGTCACGGC CAAGCTCGGC AACCGCAACA TCGACATCGT CGAGGTGCCC ATCGCCTACA CCGCGCGCGA CGTCGCCGCG GGCAAGAAAG TGCGCTGGAC CGATGGCTTC GAAGCCATGT GGGTCCTGGT CAAACACCGC ATCAAGCGCG ACTGA
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Protein sequence | MLLSVLIPAY QEEESIAEVL RRVLAIDTAA LGFDKQVIVC DDGSRDRTAE IVAEIAAADP RVRLVRHPEN RGKGAAIRSA LAEAQGDYSL IQDADLEYEV SDYPAILRPL GDGADVVYGS RFLTRSRPTG MRLPNFVANR ILTTTANLLF GLSITDEATC FKAFRTELLR DLALACEGFE FCPEVTAKLG NRNIDIVEVP IAYTARDVAA GKKVRWTDGF EAMWVLVKHR IKRD
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