| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3683 |
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| Symbol | |
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| ID | 8546073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5066144 |
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| End bp | 5067613 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646388351 |
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| Product | VanW family protein |
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| Protein accession | YP_003268077 |
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| Protein GI | 262196868 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.206654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000681281 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGAAACG CAAACACCCA GACCCGCGCT CCGCAGTCCG TGTTTTTCGG GCTGGGGGCA
GCGCTTCTCA CCGTCGGCGG TGGCTTGGTA GGCGGCTACC TGCTTTTCGG CAGCGCTGGC
GGCGTCCCCG AGGCCGAAGC CGCCGCCCGG CCCCAGGTGA CCTCGCCCGA GGCCGCAGCC
GAGCACCCGA GCGCGGCGCA GGGCCCGGTC GACGAGGCCG CGGTGGCCCG CGCCGCCCGG
GCATTTCTCG ACGCGCCCGT GACGCTGAGC GCCGGCACCG CCAGCGCCCA CTCGAGCTGG
CAGGCGCTGG GCGCCTCGGT CGACGAGAGC GCGCTCGCGC ACGCCACCGC GGTCGCCCGC
CAGGCCCTGG CCGATCGCGC CGACGCGGCG GACGAGGGCG CCATCGCGGC GGCGCTGGCC
ACGGCCGGCT CGCTGCCGCT GGTGCTCGAG CGCGAGACCG CCGTGGCCGC GCTCGCCGAG
ATCAAGGCGC GCGTCGATCG CGCCCCGCGC AGCGCGCGCA TGGACATGGA ACACCGCGCC
ATCCACGAGG AGCGCGCGGG CACCGTGCTC GATCCCTACG CCTCGCTGGC CGCGCTCGAG
GCCGCCGCGT TCAGCGGCGC CGACCACGTC GAGCTCGACA CCGTCGAGAT CGCGCCCGAG
TCCACGGTCG CCAGCCTGGG CATCGACGAC ATCTCGCAGG TGCTCGCCAG CTTCGAGACC
CGCTACTCGG TCAACGACCA CATCCGCAAC TTCAACCTCA AGCTGGCCGC CAGCAAGCTC
GACGGCTACG TGATGCAGCC GGGCCAGGAG CTGTCGTTCA ACGAGGTCGT GGGCGCGCGC
ACCGAGAACG AGGGCTACAA GATCGCCGGG GTCATCAACG CCGGCGAGAT GGTCGACGGC
CTGGCCGGCG GCACCTGCCA GATCTCGACG ACCCTGCACG GCGCCGCCTT CTTCGCCGGT
CTCGACATCG TCAAGGCGCT GCCGCACTCG CGCCCCAGCA CCTACGCGCC CATGGGCATG
GACGCCACCG TGGTCTACCC GTACGTGGAC GTGGTGCTGC GCAACAGCTA CGAGTTCCCG
GTCGCCATCC GCTTCCAGGT CACCGAGGGC AAGGCGCGGG TCGAGATCCT CGGCCGCGAG
CGCCCCTACG ACTCGATCGA GTTCGAGCGC GAGGTGGTCG AGCAGCTCGA GTTCGACACC
GTCACCCGCG AGGACGAGGG CATGCCCATC GGCACCATGA CCATCGACCA GTTCGGCTTC
TACGGCTACG TGGTCGACAA GGTCCGCAAG TATTACAAGG ACGGCAAGGT GGTCAAACGC
GACCGCTGGA AGCTGCGCTA CCGGCCCGTG ACCGAGTACG TGCGCACCGG CGTCAACCCC
GACCCCAACC TGGTCGTTCC CGACGGCGGC AAGAAGCGCA AGAAGCGCCT GCGCGAGCCC
GACGAGGGCA CCTTCCGCAT GGTCCAGTAG
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| Protein sequence | MRNANTQTRA PQSVFFGLGA ALLTVGGGLV GGYLLFGSAG GVPEAEAAAR PQVTSPEAAA
EHPSAAQGPV DEAAVARAAR AFLDAPVTLS AGTASAHSSW QALGASVDES ALAHATAVAR
QALADRADAA DEGAIAAALA TAGSLPLVLE RETAVAALAE IKARVDRAPR SARMDMEHRA
IHEERAGTVL DPYASLAALE AAAFSGADHV ELDTVEIAPE STVASLGIDD ISQVLASFET
RYSVNDHIRN FNLKLAASKL DGYVMQPGQE LSFNEVVGAR TENEGYKIAG VINAGEMVDG
LAGGTCQIST TLHGAAFFAG LDIVKALPHS RPSTYAPMGM DATVVYPYVD VVLRNSYEFP
VAIRFQVTEG KARVEILGRE RPYDSIEFER EVVEQLEFDT VTREDEGMPI GTMTIDQFGF
YGYVVDKVRK YYKDGKVVKR DRWKLRYRPV TEYVRTGVNP DPNLVVPDGG KKRKKRLREP
DEGTFRMVQ
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