| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3666 |
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| Symbol | |
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| ID | 8546056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5044879 |
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| End bp | 5045559 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646388334 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_003268060 |
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| Protein GI | 262196851 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.408922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000749166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGCGAT TCGACCTCAA CCGCAGCTCC GGCTCCCATC ACTCCCAGCA CCTACGCGGC
GTCTACCTCG GAATCGTCAC CGGCAACAAC AAGGGCGACG GCGCCAACAA GTTCCAGCTC
AAGCTGCGCT TCCCGTGGCT GCCCTCGGGC AGCTCAGAGG AGTCGTTCTG GGCGCGCATC
GCGGTGCCGA TGGCGGGCAA GGAGCGCGGG ACCTACTTCC TGCCCGAGAT CGATGACCAG
GTGCTGGTGG TCTTCATCCA CGGCGAGATC GAGCGCCCCG TGGTCATCGG CTCGCTGTGG
AGCGGCCAGG ACAAGCCGCC GGAGAACAAC CAGAACGGCG AGAACAATCT GCGCCTGATC
AAATCGCGCG CCGGCCATCG CCTCATCCTC GACGACACCA GCGGCAGCGA GCGCGTGATC
CTCACCGACT CGACCAAGAA GAACAAGATC CTGCTCGACA CGGCCAACGA CGTGGTCACC
GTCGAGACTG CCGACGGCGA CATCGACATC AAGGCCAGCA AGGTGGTCCG CATGCACGGC
AAGGCGGTCA ACATCACGAC CAAGGGCGCG TTCAAGGCCA AGGGCATGCA GCTCACGATT
TCGACCAAGG GTCCGATCAA CACCAAGGCC AGCGGGACGC TCAAGCTCCA GGCGGCCAAC
GTGCAGACCA ACGGCGCCTG A
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| Protein sequence | MTRFDLNRSS GSHHSQHLRG VYLGIVTGNN KGDGANKFQL KLRFPWLPSG SSEESFWARI
AVPMAGKERG TYFLPEIDDQ VLVVFIHGEI ERPVVIGSLW SGQDKPPENN QNGENNLRLI
KSRAGHRLIL DDTSGSERVI LTDSTKKNKI LLDTANDVVT VETADGDIDI KASKVVRMHG
KAVNITTKGA FKAKGMQLTI STKGPINTKA SGTLKLQAAN VQTNGA
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