Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3637 |
Symbol | |
ID | 8546027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5003710 |
End bp | 5009253 |
Gene Length | 5544 bp |
Protein Length | 1847 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646388306 |
Product | excinuclease ABC, A subunit |
Protein accession | YP_003268032 |
Protein GI | 262196823 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00719781 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGACCCA TCGAGTTACG CGGCGCCCGC CAGAACAACC TGTGCAGCGT CGACCTCACC CTGGAGCCGG GCACGCTGGT GGCCGTGACC GGGCCCTCGG GCGCGGGCAA GTCCTCGCTG GCCTTTGGCA CGCTGTACGC CGAGGGTCAG CGCCGCTACG TCGAGAGTTT TAGCGCCTAC GCGCGGCAGT TCCTCGAGCG CCTGGCGCGG CCCGAGGTCG ACGCGCTCGA CCCGGTGCCC GCGGCCGTGG CCGTGGATCG CAGCGCGCCG GTGCGCACCA GCCGCTCGAC CGTGGGCACG ATGACCGAGC TGTGCGACTA CGCGAAGTCG CTGTGGGCGC ACAGCGCGCG CCTCTGCTGC CCGGGCTGCG GCGCCGAGGT GCAGCCGGAC GAGCCCGGAG CCGCGGCCGA GAGCGTGATC GAGGCGCATT CGGGCGCGCG CGTGGCCGTG AGCTTCGCGG TCCGCGCCAG CTCGGCCGAC GCCCTGGCGC TGGCCCGCGA CGAGCTGCGC GCGCAGGGCT ACGGCCGGGT GCTGGCCGGC GGCGCGCTGG CCAAGCTCGA CGAGCTCGAC GACGACGCGC TGGCCGCGGC CGCGGCCGAG GACAACGCGC ATCACGGCGG CGGCGCGCTG GCCGTGATCG CCGACCGGAG CACGGCCACG GCGCGCAATC GCCGGCGCCT GAGCGAGTCG CTGGCCGCCG CCATGCACCG CGGCGGCGGC CGCGCCCGCG TGCACGTATT CGACGCCGAG GGCGGCCTCG GCGTCACCTT GCGCTTCTCC GACCGGCTGC ACTGCGCCGA CTGCGAGCGC GACTTCCGCC CGGCCACGCC CGGGCTGTTC TCGTTCAACA GCCCCATCGG CGCGTGCCCG AGCTGCCGCG GCTTCGGCCG CGTCATCGGC ATCGATGTCC GCAAGGTCCT GCCCGATCCT TCGCTGTCTC TGAGCGCGGG CGCCATCCGC CCGTGGCGCG GCAAGAAGTA CGCGTGGGAG CGGCGCGAGC TGGCCAGGCA CGCCAAGCGC GCCGGCATCC CGTGGTCCGC GCCGGTGAGC GAGCTGAGCG CCGAGCAGCT CGCCTGGCTG GTCGAGGGCG AGCCCGGCGG CTACGAGGGC GGCGGCTGGT GGGGCCTGCG CGGCTGGTTC TCGTGGCTCG AGAGCAAGAC CTACAAGCTG CACGTGCGGG TGCTCCTGGC CCGCTATCGC GCCTACGACG AGTGCCCCGC GTGCGCGGGC GCGCGGCTGC GCCCCGAGGC GCTGTGGTGG CGCGTGCGCG GGCTCGATAT GGCAGGCTTT TTGGCGCTGT CGGTGGCCGA TGCGCGGCAG TTCCTGCTCG ACTTCGATCG CGATGACGAC GGCGACGGCC ACGGCGACGG CGCAGCGGCT GGCTCTGCGC GCGCTCGCGG CGCCCGCGGT GATGGTCGCG AACGCGATGA CGCCGCCGCG CTGCTGCGCG CCGAGTGTCT GCGCCGGCTG AGCACGCTGG CCGATGTCGG CCTGGCCTAT CTCACCCTCG ACCGCGCCTC GCGCACGCTC TCGGGCGGCG AGACCCAGCG CGTGGCGCTC ACGGGCGCTC TGGGCGCGTC GCTGGCCGGC GCGTTGATCG TCATGGACGA GCCCTCGGTG GGCCTGCACC CGCACGATGT CGGACGCCTG GCCGAGGTCG TCCAGCGCCT GGCCGCGGCC GACAACACCG TGCTGGTGGT CGAACACGAT TGGGCATTGA TCCAGCGCGC CGACCGCGTG GTCGAGCTCG GACCCGGCGC CGGTCGCGAG GGCGGCCGCG TGGTCTTCGA CGGCGCCCCC GAGGAGCTGC TGAGCAGTGA CACCGCCACC GGCCGCGCCC ACCGCGGCGC GCGCGCGGCC GCCTTGGTGC GGCGCGAGCC GAGCGCGTGG ATCGAGCTGC GCGCGGCCAC CGGCCACAAC CTGCGCGGCG TCGATGTCGC CATCCCGCGC GGGCTGCTCA CCTGCGTCAC CGGCGTGAGC GGCTCGGGCA AGAGCTCGCT GATCCTGGGC ACGCTGGCCC CGGCCGTGAT CGCGGCCCTG GGCGGCGAGG TCGAAGAGCC CGCCCTGCCC CACGCCGCGC TCGCGGGCGC CGACGCGCTG GCCGACGCCG TGGTCGTCGA TCAATCGCCG CTGGGGCGTA CGGCGCGCGG CAACCCGGCG ACTTACGTGA AGGCCTGGGA CTGGATCCGG GGCGCGCTGG CCAAGACCGA GATGGCCGCG GCCCGGGGGC TGAGCGCGGG CGCGTTCTCG TTCAATGTGC CCGGCGGCCG CTGCGAGTCG TGCAAGGGCG AAGGCGCCGA GACCGTGGAG ATGCAGTTTC TGGCCGATGT CTCGTTCTCG TGCCCGGACT GCGGCGGCAA GCGCTTCGTC GGCCCGGTGC TCGAGGTCCG CTACCAGGGC AAGAACGTGG TCGACATCCT CGAGATGAGC GTCGATGAGG CCCTGGCCTG CTTCTCCTCG CGCACGCTCA CGCGCCGCCT GCAGCCGGTG GTCGATGTCG GCCTGGGCTA TCTGCGCCTG GGCCAGCCGC TCAACACGCT CTCGGGCGGC GAGGCGCAGC GGCTCAAGCT GGCCGAGGCG CTAGCGCGCA CCAAGGCCGG CGGGCTGGTC ATCCTCGACG AGCCCACGGC CGGGCTGCAC GCCCAGGACG TGGTGCCGCT GCGGCGCTCG CTCGAGGCGC TGGTGGCGCG CGGCGACACC GTGGTCGTGG TCGAGCACGA CATGGCGCTG GCCGCGCACG CCGATTGGAT CGTCGACCTC GGGCCCGGCG CCGGCGCCCA CGGCGGCACC ATCGTCGCGA GCGGGACCCC CGAGCAGGTG GCCGCGGCGC AGGGCTCGAG CACGGCGCCG CACTTGGCCG CGGCGCTGGC CGCACACAGT TCGTCCACGC GGACGAAATC GTCCCCGGCC GGCCGCGCGT CGGCGTCGGT GGGCGCGAGT CGCGCGGCGC AGCCCGGGCC GGTGTGGCAG CGCGCGCCCA TCGCGGGCGC CGATATCGAG ATTCTCGGCG CCCGCGAGCA CAACCTGCGC GATCTCAGCC TGCGGCTGCC GCGCGAGCAG CTCGTCGTGG TCACCGGGCC CAGCGGCAGC GGCAAGAGCA CCCTGGCCTT CGACGTGCTC TACGCCGAGG GCCAGCGCCG CTATCTCGAG ACCCTGTCGC CGTACGCGCG CCAGTACATG CCGCAGTTGC CGCGGCCCGC GGTCGATCGC GTGCTCGGCG TGCCGCCCAG CGTGGCCCTC GAGCAGCGCG TGCACCGCGG CGGCGCGGGC TCGACCGTGG CCACCATCAC CGAGGTCGCC CACTACCTGC GGGTGATGTA CGCGCGCGCC GGGCTGCTGC ACTGTCCCGA CTGTGAGGTG GCCATCGCGC CGCGCGCGCC CGAGCTGCTG GCGCGCGATC TCGCGGCGCT GGCCCGGCCC GACGGCGACG GCGACGGCGA CGGCGACGCC TGGCTGGTGA TGGCGCCCGT GGTGCGCGGC CGCAAGGGCC TGCACCGCGA GCTGCTGGCG CGGGCGCGCG AAGACGGCAT CGAGCGCGCG CGCATCGACG GCGCGTTCAC GGCGCTGCGC GCGGGCATGA AGCTCGACCG CTACCGCGAG CACGATGTCG AGCTGGTCAT CGCCGAGTTG CCGGCCGAGG ACGCCGCCAT GCCGGCTGCC CTGGGTCGCG CCGCGGCGCT CAGCGGCGGC AGCGTGCGCG TGCGCCGCGG CCAGCAGGAG CTGCTGCTGT CGACCCAGCG CGCGTGCCCC TCGTGCGGCA CCGGCTTCCC CGAGCTCGAC CCGCGCATGT TCTCCTTTCA CACCCGCCAG GGCGCCTGCC CCGCGTGCGA GGGCCGCGGC GTCATCGAGC CGGCCACGCG CCGCAAGCGC GGCAAACGCG CGGCCGCCGA GGCGCCGCCC AAGACCTGCC CGGACTGCGC CGGCACCCGG CTCTCGCCCC TGGCCCGGGC CGTGACCGTG GCCGGCTGGT CGATCGCCGA GCTCTTCGGC CGCAGCGTGC TCGAGGCCGG CCGCGCGCTC GCCGACATGC AGCTCGACGG TCGCGACGCC ACCATCGCCG CCGTGCCCCT GGCCGAGGCC CGCGCCCGGC TGTCGTTTCT GGCCTCGGTG GGCGTCGGCT ACCTCGAGCT CGACCGTCCC GCGGCCACGC TCTCGGGCGG CGAGACCCAG CGCGTGCGCC TGGCCGCCCA GCTCGGCAGC GGCCTCACCG GCATCCTGTA TGTGCTCGAC GAGCCCACCA TCGGCCTGCA CCCGCGCGAC ACCGGCGTGC TGCTGGACGC GATGCGCGCG CTGGTCGAGC GCGGCAACTC GCTGGTGGTG GTCGAGCACG ATCCCGACAC CATCCGCGCC GCCGACTTTC TCGTCGACAT CGGCCCGGGC GGCGGCCACC ACGGCGGCCG CCTGCTGGCC TGCGGCGCCG CCGCCGAGGT GCTGGCCGAG GACCGCGCGC CGACCGCGGC CGCGCTGCGC CGCCCGCCGC CCGTGCCGGC CCAGCGGCGC GTGCCCGACG ACGCGGCCCA GCTCGAGCTG CGCGGCGCCC GGCGTCACAA CCTGCGCGAT CTCGACCTGC GCCTGCCGCT CGGCTGCCTG GTCGCGGTCA CCGGCGTGAG CGGCTCGGGC AAGTCCACCC TGATCCGCGA GGTGCTGCTC GAGGCCGTGG GCGACGCCCT GGCCCGGCCC GCGCGCACTC CACCCAGGAG CCAGCGCGCC TACCGCGAGC TGCGTGGCGC CGAGGCGCTG CGGCGCGCGG TGGAGATCGA CCAGAGCCCC ATCGGCCGCA CCTCGCGCTC GGTGCCGGCG ACCTATGTCG GCGTGTGGAA CCACATCCGC GCCCTGCTCG CGAACACGCC CGAGGCGCGC GCGCGCGGCT ACGGGGCCGC GCGCTTCTCA TTCAACACCG CCGAGGGCCG CTGCCCCACC TGCGAGGGCC AGGGCCGGCT CAAGGCCGAG ATGGCGTTTT TGCCCGACGT CGAGATGGAC TGCGAGGCCT GCGCCGGCAT GCGCTTCGAC CCCGACACCC TCGACATCAC CTGGCGCGGC CGCAACGCCG GCGAGATCCT GGCGCTCGAG ATCGGCGAGG CCGCCGAGGT CTTCGCCTCG GTGTCCAAGG TCGCGCGGCC CCTGGCCCTG CTCGACGAGC TCGGCCTCGG CTACCTCAAG CTGGGCCAGC CCTCGAGCAC GCTCTCGGGC GGCGAGGCCC AGCGCCTCAA GCTGGTCTCC GAGCTGGGCG CGCGCAGCCC GGGCGGCACC CTCTATGTCA TGGACGAGCC CACCACCGGC CTGCACCGCG ACGATGTCGT CCGCCTGCTG GCCTTGCTCG ACCGATTGGT CGAACGCGGC GACACCGTGG TGGTGATCGA ACATCACACC GACGTGATGC TGGCCGCCGA CTGGATCGTC GATCTCGGCC CCGAGGGCGG CGCCGAGGGC GGCCGCGTGC TGGTGAGCGG CCCGCCCGAG GACGTTGCCG CCTGCGCCGA GAGCCACACC GGCGCCGTGC TGGCCGCCGA ACTGCAGCGC AGTGCGCACG GATCTGACAC ATGA
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Protein sequence | MRPIELRGAR QNNLCSVDLT LEPGTLVAVT GPSGAGKSSL AFGTLYAEGQ RRYVESFSAY ARQFLERLAR PEVDALDPVP AAVAVDRSAP VRTSRSTVGT MTELCDYAKS LWAHSARLCC PGCGAEVQPD EPGAAAESVI EAHSGARVAV SFAVRASSAD ALALARDELR AQGYGRVLAG GALAKLDELD DDALAAAAAE DNAHHGGGAL AVIADRSTAT ARNRRRLSES LAAAMHRGGG RARVHVFDAE GGLGVTLRFS DRLHCADCER DFRPATPGLF SFNSPIGACP SCRGFGRVIG IDVRKVLPDP SLSLSAGAIR PWRGKKYAWE RRELARHAKR AGIPWSAPVS ELSAEQLAWL VEGEPGGYEG GGWWGLRGWF SWLESKTYKL HVRVLLARYR AYDECPACAG ARLRPEALWW RVRGLDMAGF LALSVADARQ FLLDFDRDDD GDGHGDGAAA GSARARGARG DGRERDDAAA LLRAECLRRL STLADVGLAY LTLDRASRTL SGGETQRVAL TGALGASLAG ALIVMDEPSV GLHPHDVGRL AEVVQRLAAA DNTVLVVEHD WALIQRADRV VELGPGAGRE GGRVVFDGAP EELLSSDTAT GRAHRGARAA ALVRREPSAW IELRAATGHN LRGVDVAIPR GLLTCVTGVS GSGKSSLILG TLAPAVIAAL GGEVEEPALP HAALAGADAL ADAVVVDQSP LGRTARGNPA TYVKAWDWIR GALAKTEMAA ARGLSAGAFS FNVPGGRCES CKGEGAETVE MQFLADVSFS CPDCGGKRFV GPVLEVRYQG KNVVDILEMS VDEALACFSS RTLTRRLQPV VDVGLGYLRL GQPLNTLSGG EAQRLKLAEA LARTKAGGLV ILDEPTAGLH AQDVVPLRRS LEALVARGDT VVVVEHDMAL AAHADWIVDL GPGAGAHGGT IVASGTPEQV AAAQGSSTAP HLAAALAAHS SSTRTKSSPA GRASASVGAS RAAQPGPVWQ RAPIAGADIE ILGAREHNLR DLSLRLPREQ LVVVTGPSGS GKSTLAFDVL YAEGQRRYLE TLSPYARQYM PQLPRPAVDR VLGVPPSVAL EQRVHRGGAG STVATITEVA HYLRVMYARA GLLHCPDCEV AIAPRAPELL ARDLAALARP DGDGDGDGDA WLVMAPVVRG RKGLHRELLA RAREDGIERA RIDGAFTALR AGMKLDRYRE HDVELVIAEL PAEDAAMPAA LGRAAALSGG SVRVRRGQQE LLLSTQRACP SCGTGFPELD PRMFSFHTRQ GACPACEGRG VIEPATRRKR GKRAAAEAPP KTCPDCAGTR LSPLARAVTV AGWSIAELFG RSVLEAGRAL ADMQLDGRDA TIAAVPLAEA RARLSFLASV GVGYLELDRP AATLSGGETQ RVRLAAQLGS GLTGILYVLD EPTIGLHPRD TGVLLDAMRA LVERGNSLVV VEHDPDTIRA ADFLVDIGPG GGHHGGRLLA CGAAAEVLAE DRAPTAAALR RPPPVPAQRR VPDDAAQLEL RGARRHNLRD LDLRLPLGCL VAVTGVSGSG KSTLIREVLL EAVGDALARP ARTPPRSQRA YRELRGAEAL RRAVEIDQSP IGRTSRSVPA TYVGVWNHIR ALLANTPEAR ARGYGAARFS FNTAEGRCPT CEGQGRLKAE MAFLPDVEMD CEACAGMRFD PDTLDITWRG RNAGEILALE IGEAAEVFAS VSKVARPLAL LDELGLGYLK LGQPSSTLSG GEAQRLKLVS ELGARSPGGT LYVMDEPTTG LHRDDVVRLL ALLDRLVERG DTVVVIEHHT DVMLAADWIV DLGPEGGAEG GRVLVSGPPE DVAACAESHT GAVLAAELQR SAHGSDT
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