Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3635 |
Symbol | |
ID | 8546025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5001275 |
End bp | 5001670 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 646388304 |
Product | DoxX family protein |
Protein accession | YP_003268030 |
Protein GI | 262196821 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.176177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000433315 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAAAC AGACCTCGAC CTCACTCGGA CTCTTGCTGC TCAGGGTGAG CATCGCAAGC ATGATGCTCT TCGGCCACGG TTTGCCCAAA CTGCTCGATT TCGGCGAGAA ATCGGCCAAT TTTCCGGATC CCCTGGGCAT CGGCAACACC GTGAGCATGG CCGCCGCCGT CTTCGGTGAA GTGGTGTGCG CGGCGTTCAT CATCGTCGGC TTGTTCACCC GCGCAGCCGC GATCCCGTTC CTGTTCACCA TGCTGGTGGC GGCCTTCGTG GTGCACTCCG CCGATCCCTG GGCAAAGAAG GAATTCGCCA TCCTGTACGC GATTCCCGCG CTTAGCTTGC TGTTTACGGG GGCCGGCGCC TTCTCCATCG ACGGCTGGCG CAAGCGCTCG ACCTGA
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Protein sequence | MTKQTSTSLG LLLLRVSIAS MMLFGHGLPK LLDFGEKSAN FPDPLGIGNT VSMAAAVFGE VVCAAFIIVG LFTRAAAIPF LFTMLVAAFV VHSADPWAKK EFAILYAIPA LSLLFTGAGA FSIDGWRKRS T
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