Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3514 |
Symbol | |
ID | 8545903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4844448 |
End bp | 4846286 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646388182 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003267909 |
Protein GI | 262196700 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGA CCGAGACCGC CCCTCTGACG CGCAAATTCC AGCACCTCGT CGAGCTTTTC GAGCACCGGG TCACCGAGAT GCCGGAGCGG GAGGCGTTTC GCTTTCCCAG CGGTGACTCC TGGGTGTCTC TGACCTGGGC GCAGACCGCC GAGCGGGTGC GCGACGTGGC CGCCGGTCTG CTCGCGCTCG GCATCGAGGC CGAGGACCGC TGCGCCATCA TGTCGAGCAC GCGGGTGGAG TGGATCCTGG CCGATCTGGG CACGCTCAGC GCGGGCGCGG CCACGACCAC GGTGTATCCC TCGACCACGA TCGACGAGTG CGCCCATATC CTGGCCGATT CGGCGTGCAA GGTGGTGTTT GCCGAGGACG ACGAGCAGGT GGCCAAGATC ATGGCCAACC GCGACAAGCT CGGCGAGCTG CGCCACGTGG TCGTGTTCGC GGGCGAGTCG GACGGCGAGT TTCTCGTCAG CCTGGACGAA CTCGAGCGCC GCGGCCGCGC CCGGCGCGAG AGCGAACCCG ACGAGCTGTC CAAAATCAGC GCGGGCCTGA GCAGCGAGCG CCTGGCGACC ATCATCTACA CCTCGGGCAC CACCGGCATG CCCAAGGGCG TGCGCCTCAG CCACGACTGC TGGACCTACT GCGCCGAGGC CATCCGCGCG CTCGAGACCA TCGGCCCCGA CGACCTGCAG TACCTGTGGC TGCCGCTGGC GCACTCGTTC GCCAAGGTGC TGCTGGCCGG CCAGCTCGCC ATCGGCTGCC CCACGGCCGT GGACGGCCGC ATCCCCAAGC TGGTCGAGAA CCTGGGCGTG GTCCGCCCGG TGTGGATGGC GGCGGCGCCG CGCATCTTCG AAAAGGTCTA CAACCGCGTG GTCAGCGGCG CCAAAGAGGG CGGGGGGCTC AAGTTCCGCA TCTTTCGCTG GGCGGTGGCC CGCGGGCGCC AGGTGTCGGC GCTGCGGCAG CAGGGCAAGG AGCCGCGCGG CCTCTTGGCG CTGCAGTACA AGCTCGCCCA CAAGCTGGTG TTCAGCAAGC TAAACGAGCG CTTCGGCGGC CGGGTGCGCT TCTTCATCTC GGGCAGCGCG CCGCTGTCGC GCGAGATGGC CGAGTTCTTC CACGCCGCCG GCTTCCTCAT CCTCGAGGGC TACGGGCTCA CCGAGACCAG CGCGGCGTCG ACGGTCAACC GCCTCAATGA CTACAAGTTC GGCAGCGTCG GCAAGCCGCT GGCCGGCACC AAGATCAAGG TGCTCGAGGA GGACGGCGAG CTGTGCATCC GCGGCCCCGG CGTGATGGGC GGCTATCATC AGCTCGCCGA GCAGACCGCC TCGGTGCTCG ACGACGAGGG CTGGCTGCAC ACCGGCGACA TCGGCACCAT CGACAGCGAT GGCTTCGTGT TCATCACCGA CCGCAAGAAG GACCTGATCA AGACCTCGGG CGGCAAGTAC GTGGCGCCGC AGCACATCGA GGGCCTGTTC AAGAGCCTGT GCCCGGTGGC CAGCCAGTGC GTGGTGCACG GCGATCAGCG CAACTACTGC ACCGCCCTGA TCTCGCTCGA CGAGGAGTCG ATCGCCGGCT GGGCGATTCA AAACGGCCTC TCGGGGCTGC CCTACGAGGA GCTGACGCGG CATCAGAAGG TGCGCTCGAT GGTTCAGGAG TACGTCAATC AGCTCAACGA GAAGCTGGCC TCGTACGAGT CGATCAAGCG CTTCGCCATC CTGCCCCGCG ACCTCTCGGT GGAGGAGGGC GAGCTCACGC CCAGCCTCAA GGTGAAACGA AAATTGGTCG AGCGGAAATA CAAGGACACG CTCGATGCGC TATACGAGGG ATCGCTCGAG TCGATCTAG
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Protein sequence | MTETETAPLT RKFQHLVELF EHRVTEMPER EAFRFPSGDS WVSLTWAQTA ERVRDVAAGL LALGIEAEDR CAIMSSTRVE WILADLGTLS AGAATTTVYP STTIDECAHI LADSACKVVF AEDDEQVAKI MANRDKLGEL RHVVVFAGES DGEFLVSLDE LERRGRARRE SEPDELSKIS AGLSSERLAT IIYTSGTTGM PKGVRLSHDC WTYCAEAIRA LETIGPDDLQ YLWLPLAHSF AKVLLAGQLA IGCPTAVDGR IPKLVENLGV VRPVWMAAAP RIFEKVYNRV VSGAKEGGGL KFRIFRWAVA RGRQVSALRQ QGKEPRGLLA LQYKLAHKLV FSKLNERFGG RVRFFISGSA PLSREMAEFF HAAGFLILEG YGLTETSAAS TVNRLNDYKF GSVGKPLAGT KIKVLEEDGE LCIRGPGVMG GYHQLAEQTA SVLDDEGWLH TGDIGTIDSD GFVFITDRKK DLIKTSGGKY VAPQHIEGLF KSLCPVASQC VVHGDQRNYC TALISLDEES IAGWAIQNGL SGLPYEELTR HQKVRSMVQE YVNQLNEKLA SYESIKRFAI LPRDLSVEEG ELTPSLKVKR KLVERKYKDT LDALYEGSLE SI
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