| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3502 |
|---|
| Symbol | |
|---|
| ID | 8545891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4830249 |
|---|
| End bp | 4830761 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 646388170 |
|---|
| Product | protein of unknown function DUF721 |
|---|
| Protein accession | YP_003267897 |
|---|
| Protein GI | 262196688 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.428989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAGC GGCCCAGCCG CGAACATCGG AGCGCCGAAG CGCCCGCCGG GCAGCTCATC
CAGGAGCTGC TGGACGATTA CCGGCTGCTC GAGCCGGTGC GCCGCCACCG GGTCATCACC
GAGTGGCTCG ACATCGTCGG CCCCAAGCTG GCCGCGCGCA CCTGGCCGGA GCAGCTCGCC
GAGGGCGTGC TGCGGCTGCG CGTGGCCAAC TCCTCGTGGC TGCATCACCT GTCGTTTCTG
CGCGACGACA TCCGCGAGCG CATCAACCGC CACCTGGGCG ATCCGCCGCT GGTGAGCGAG
GTGCGTCTGC ATCTGGGCCG GAGCGTGCGC GACGGCGACT CGCTGCTGCC GCGGGTGTCG
TCGTCGCGCA AGCGCGCGCG CCGGGACGGC CGCCCCCTGC CGCCGCCGGC CGAGGGCGAG
CGCCTGGCCG CCATCGACGC CGAGACCGCG TGCATCGACG ACGAGGAGCT GCGCGCCGTG
ATCCGCGAGG CCCGGCGACG CCTCGGAGAG TGA
|
|---|
| Protein sequence | MSKRPSREHR SAEAPAGQLI QELLDDYRLL EPVRRHRVIT EWLDIVGPKL AARTWPEQLA
EGVLRLRVAN SSWLHHLSFL RDDIRERINR HLGDPPLVSE VRLHLGRSVR DGDSLLPRVS
SSRKRARRDG RPLPPPAEGE RLAAIDAETA CIDDEELRAV IREARRRLGE
|
|---|
| |