Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3480 |
Symbol | |
ID | 8545869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4807981 |
End bp | 4808460 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646388148 |
Product | 6,7-dimethyl-8-ribityllumazine synthase |
Protein accession | YP_003267875 |
Protein GI | 262196666 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0054] Riboflavin synthase beta-chain |
TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0202841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.489081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGG TATTCGAAGG CAAACTCACC AGCACGGGTC TGCGCGTCGG CATCGTCTGC GGACGCTTCA ACGGCTTCAT CGTGCAGTCT CTCCTCGAAG GCGCGGTCGA CGCCGTGGTG CGCAGCGGCG GCAGCGCCGA CAGCATCTCG GTGTACTGGT GCCCGGGCGC CTACGAGATC CCGCAGGTGC TGCGCGAGGT CGTGGCCCGC GGCAGCCACG ACGCCGTGGT CTGCCTGGGC GCGGTCATCC GCGGCTCGAC GCCGCATTTC GACTACGTGG CCGGCGAGGT CTCCAAGGGC ATCTCGCAGG TCGCGGCCGG CGCCGAGATC CCGGTGACCT TCGGCGTGCT CACCACCGAC ACCATCGAGC AGGCCATCGA GCGCGCCGGT ACCAAGGCCG GCAACAAGGG CTTCGAGTCG GCCATGGCCG CGATCGAGAT GGTCAACCTG TTCCGCATGA TCCGAGGCGC TGCGCAATGA
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Protein sequence | MPKVFEGKLT STGLRVGIVC GRFNGFIVQS LLEGAVDAVV RSGGSADSIS VYWCPGAYEI PQVLREVVAR GSHDAVVCLG AVIRGSTPHF DYVAGEVSKG ISQVAAGAEI PVTFGVLTTD TIEQAIERAG TKAGNKGFES AMAAIEMVNL FRMIRGAAQ
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