Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3438 |
Symbol | |
ID | 8545826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4751517 |
End bp | 4751894 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646388105 |
Product | RNP-1 like RNA-binding protein |
Protein accession | YP_003267833 |
Protein GI | 262196624 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0963576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0234751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAAACA AGATTTTTGT CGGGGGCCTG AGCTGGGATA CGGACGATTC GAGCCTGCGT GCAGCGTTCG AGCGGTTCGG AGCCGTCACC GAAGCCAAAG TGATCACGGA TCGGGATACA GGTCGCTCGC GCGGTTTCGG ATTTGTCACC TTCGCCGAGT CCGGCCAGGC CGCGGCAGCC ATCGAAGAGA TGGACGGTGT TGAGCTCGAC GGTCGCAACA TCCGCGTCAA CGAGGCTCAG GAGCGCAGCC GTGGCGGCGG CGGCGGCGGC GGTGGCGGTG GCTACCGCGG CGGCGGCGGC GGCGGCGGCG GTGGCGGTCG CGACGGCGGT CGCCGCCGTG GCGGCCGTGA CGGCGGCGGC GGCGGCGGCC GCTGGTAA
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Protein sequence | MSNKIFVGGL SWDTDDSSLR AAFERFGAVT EAKVITDRDT GRSRGFGFVT FAESGQAAAA IEEMDGVELD GRNIRVNEAQ ERSRGGGGGG GGGGYRGGGG GGGGGGRDGG RRRGGRDGGG GGGRW
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