Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3422 |
Symbol | |
ID | 8545810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4723176 |
End bp | 4725818 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646388089 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_003267817 |
Protein GI | 262196608 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0998408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0667766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGC GCACGCCGCG AGACACGCCG ATGATGCGGC AGTACATGGA GATCAAGGAC CAGCATCCCG ACGCGGTGCT GTTCTTCCGC CTCGGCGATT TCTACGAAAT GTTCTACGAG GACGCCGAGG TAGCGGCCAA GGCCCTCGAT CTCACGCTCA CCTGTCGCCA CAAGGACAGC GCCAACCCCG TGCCCATGGC CGGCGTGCCG CATCACGCCG CGCGCGGCTA CATCGCCCGG CTCACCGAAC AGGGCTACAA GGTCGTGGTC TGCGAGCAGG TCGAGGACCC CAAGCTGGTC AAGGGCATCG TCAAGCGCGC GGTGGCCCAG GTCATCACGC CCGGCGTGGT GCTCGACGAG GAGGTCCTCG ACCCCAAGCA GCCGCGCTAT CTGGCCGCGA TCGCGTGTGA GGGCGGGCGC TACGGCCTGT CCTTTCTCGA CGTCTCCACC GGCGAGTTCC GGGCCACCGA GCTCGACAGC GAGGACGGCT TGCTCGACGA GCTGGCCCGG GTGCGGCCGC GCGAGATCCT GGCCGGCGCG CGCAACCTGG CCGAGGGCGG TCCGCTCACG GCGACCCAGC GCGACTTCAA CCAGGTCACC TATTCGCCGG TCGAGCCCCA CACCTGGGGC CAGGCCAAGA CGCTGTTGGT CTCGCTGCTC GCGGGCGACA GCGCCAGCCT CGGCCTCGAG GAGCGCATCC TGGCCTCGCG CGCGGCCGCC GACGTCATCG GCTACGCGCG CAGCACGCAG CCCACCGGGG TGTTGCCCGT GAGCCGCTTG CAGCTCTACG AGCCCGGCGA CACCATGATG CTCGACGAGG CGGCCATCGC CAACCTGGAG CTGACCGAGA CGCTCATCGG CGGCCGGCGC GCGGGCACGC TGCTGTCGGT CATCGACGAG ACCTGCACCG CCCCGGGCGG TCGTCTGCTG CGCCACTGGC TGCTGTATCC GCTCAGCGAG GTGGCCCCGA TCCGGCGGCG CCAGGACGCG GTCGGCTATT TTGTCGAGCA CGCCAGCCTG CGCCGTTCGG TGCGCGAGGT GCTCGAGGGC GTGCACGATC TCGAGCGTCT GGCCGCGCGC GTCGGCCTCG GCGTGGCCAC GCCCCGCGAC CTGGGCCGGC TGCGCGACTC GCTGGTGCAG CTCCCGTCGC TGTCGGCGCT CTTGGCCAGC CCGGTGGTCC AGGCCGGGGG CGAGAGCCCG CTCGACGCGG TGCCCGCGCT GCTGCGTTTC AACAACGCCA TCCTCGGCGA GCTGGCCGAG CTGCAGGGCT TGCTGTCGCG CGCGCTGGTC GACGAGCCCG GGCCGCTGGC GCGCGAGGGC GGCTTCATCC GCGCCGGCTA CTGCCGCATC GTCGACGAGA GCCGCAGCCT GGCCGACGGC AGCAAAGAGG CCATCTTGGC CATCGAGACC CGCGAGCGCG AGCGCACCGG CATCGGCTCG CTCAAGGTCA AGTACAACCG CGTCTTCGGC TATTACATCG AGGTCACCAA GGCCAACCTG GCCCGGGTCC CGGCCGAGTA TGTGCGCAAG CAGACCATCG CCACGGGCGA GCGCTACGTG ACCACCGAGC TGGCCGAGCT CGAGACCAAA GTGCTGGGCG CCCAGGAGCG CTTGCTCGAG CGCGAGCAGG AGCTGTTCGC CGAGCTGTGC GCGGCCGTGG GCGAGCGCGC CGGCGGGCTG CGCGACGTCG GCGAGCGGGT CGCCGGCATC GATTGTCTGG CCAACCTGGC CGAGATCGCG CACGTGCGCG ACTACCGCTG CCCCGAGGTC GACGACGGCG AGCGCCTCGA GATCGTCGAG GGTCGTCACC CCGTGGTCGA GCGCACCGTG CCGACCGGGC GTTTCGTGCC CAACGACTGC CAGCTCGACC CGCGCGAGGC GCAGATCCTG CTCATCACCG GGCCCAACAT GGCCGGCAAG TCGACCTACA TGCGGCAGGT GGCCCAGATC GTCGTGCTCG CGCAGATGGG CAGCTTCGTG CCGGCCAAGC GGGCGCGCGT GGGCATTGTC GACCGCGTGT ACACGCGCGT GGGGGCGGCC GACAACCTGG CCCGCGGCGA GTCCACCTTC ATGGTCGAGA TGCGCGAGAC CTCGGCCATC ATGCGCGGGG CCACGCGGCG TTCGCTGGTG GTGCTCGACG AGGTCGGCCG CGGCACCTCG ACCTTCGACG GCGTGTCCAT CGCGTGGGCG GTGACCGAGT ATCTGCACGA CGCCATCGGC GCGCGCACCT TGTTTGCCAC CCACTATCAC GAGCTGTGCG CGCTGTCCGA GGTGCGGCCG CGGGTGCGCA ACGTGTCGAT GGCGATTCGC GAGCACGAGG GCGACATCGT GTTCCTGCGC CAGGTGGTCG CCGGCGGCGC CAGCAAGAGT TACGGCATCG AGGTCGCGCG GCTGGCCGGG CTGCCGCGAT CCTTGGTGTC GCGGGCGCGG CAGATCTTGG CGCAGCTCGA GGGCGGGCGC GAGTGGCACC AGCCCAGCCA GCTCACCCTG TTCTCGGCCG CGCAGTCGGC GCCGCCCGAC GAGCCCGAGG GCGAGGCCGG AGGCGCCATC GTCGAGCGCC TGCGCGGCCT CGACCCGCAG CGCATGACGC CCATCGAGGC GCTGCAAGTG CTCGCCGAGC TGTGCTCGGA AGCCGGGCGC TAG
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Protein sequence | MAKRTPRDTP MMRQYMEIKD QHPDAVLFFR LGDFYEMFYE DAEVAAKALD LTLTCRHKDS ANPVPMAGVP HHAARGYIAR LTEQGYKVVV CEQVEDPKLV KGIVKRAVAQ VITPGVVLDE EVLDPKQPRY LAAIACEGGR YGLSFLDVST GEFRATELDS EDGLLDELAR VRPREILAGA RNLAEGGPLT ATQRDFNQVT YSPVEPHTWG QAKTLLVSLL AGDSASLGLE ERILASRAAA DVIGYARSTQ PTGVLPVSRL QLYEPGDTMM LDEAAIANLE LTETLIGGRR AGTLLSVIDE TCTAPGGRLL RHWLLYPLSE VAPIRRRQDA VGYFVEHASL RRSVREVLEG VHDLERLAAR VGLGVATPRD LGRLRDSLVQ LPSLSALLAS PVVQAGGESP LDAVPALLRF NNAILGELAE LQGLLSRALV DEPGPLAREG GFIRAGYCRI VDESRSLADG SKEAILAIET RERERTGIGS LKVKYNRVFG YYIEVTKANL ARVPAEYVRK QTIATGERYV TTELAELETK VLGAQERLLE REQELFAELC AAVGERAGGL RDVGERVAGI DCLANLAEIA HVRDYRCPEV DDGERLEIVE GRHPVVERTV PTGRFVPNDC QLDPREAQIL LITGPNMAGK STYMRQVAQI VVLAQMGSFV PAKRARVGIV DRVYTRVGAA DNLARGESTF MVEMRETSAI MRGATRRSLV VLDEVGRGTS TFDGVSIAWA VTEYLHDAIG ARTLFATHYH ELCALSEVRP RVRNVSMAIR EHEGDIVFLR QVVAGGASKS YGIEVARLAG LPRSLVSRAR QILAQLEGGR EWHQPSQLTL FSAAQSAPPD EPEGEAGGAI VERLRGLDPQ RMTPIEALQV LAELCSEAGR
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