Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3416 |
Symbol | |
ID | 8545804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4716202 |
End bp | 4717338 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646388083 |
Product | amidohydrolase |
Protein accession | YP_003267811 |
Protein GI | 262196602 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.729562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.139217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC GCTTTGTCTC TTTGCCGCTT GGCGGTGTCG GCTGCTTCGG TTACAGGTCG AACATGCCCC CTCACTCGCG CCGCGGTCAC GTCAACGCTC ACACGCACAT CTACAGCGCC CTGGCGCCCT TCGATATGCC GGCACCGCAG CCGCCGCCCG AGAGCTTTTT GCAGATCCTC GAGCGGGTGT GGTGGCGTCT CGACCGCGCG CTCGACGAGC AGGCGCTGGC CGCGGGCGCC GACTACTACG TGGCCGAGGC GCTGATGGCG GGCACCACCT GCCTCATCGA TCATCACGAG TCGCCCAACT TCATCGACGG CTCGCTCGAT GTGCTGGCCG AAGCCTGCCA GCGCCTGGGG ATGCCGGCGG TGCTGTGCTA CGGCGCCACC GAGCGCAACC GCGGCCGCGA CGAGGCCCGC GCCGGTCTGG CCGAGTGCGA GCGCTTCCTG CGCACCAATG AGCGCCCGCT GGTGCGCGGC GCGGTCGGCC TGCACGCGTC GTTCACGGTC TCGGACGACA CCATCGGCGA GGCCGCGGCC CTGGCCCGCT CGCTGGGCGC GGTGCTGCAC CTGCACGTGG CCGAGGGTCC CGAGGATGTC GCCGACGCCC GCCGCCGCGG CGACGCCAGC CCGCTGGCGC GCCTGCGCCG GCTCGACGCG CTGGTGCCCG GGTCGATCCT GGTCCACGGC GTGTACCTCA CGGCCGAGGA GGTGGCCGAG TGCGAGCAGC GCGGGCTGTG GCTGGTGCAG AACCCGCGCT CGAACCGCGG CAACGGGGTC GGCTATCCCA GGGCGCTCAC GCACAGCCGG TGCGTGGCGC TGGGCACCGA CGGCTACCCG GCGGATATGA ACGACGAGGT CGCCGCGCTG TTCGCCGAGG CAGAGGAGGT CGAGGATGAA TCGCCGCGTC TGGGCAACCG CCTGGGCGCC GGCCACGCTC TGTGCGCGGC CCTGTTCGGC GGCGAGCCGC CCGAGGTCGA CGTCCACGAG CCCATGGGCA GCCCCGAGAT GCGCGTGGAC GTCGCCGGGC GCGAGGTGGT CGCCGGCGGC GAGCTGCTCA CCGGTGATCG CGCGGCCTTC GAGGCCCGCG CCCGGACCCA GGCCGAGCGG CTGTGGCAGC GCATGGCCGC GCTGTGA
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Protein sequence | MSARFVSLPL GGVGCFGYRS NMPPHSRRGH VNAHTHIYSA LAPFDMPAPQ PPPESFLQIL ERVWWRLDRA LDEQALAAGA DYYVAEALMA GTTCLIDHHE SPNFIDGSLD VLAEACQRLG MPAVLCYGAT ERNRGRDEAR AGLAECERFL RTNERPLVRG AVGLHASFTV SDDTIGEAAA LARSLGAVLH LHVAEGPEDV ADARRRGDAS PLARLRRLDA LVPGSILVHG VYLTAEEVAE CEQRGLWLVQ NPRSNRGNGV GYPRALTHSR CVALGTDGYP ADMNDEVAAL FAEAEEVEDE SPRLGNRLGA GHALCAALFG GEPPEVDVHE PMGSPEMRVD VAGREVVAGG ELLTGDRAAF EARARTQAER LWQRMAAL
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