| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3191 |
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| Symbol | |
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| ID | 8545579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4397191 |
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| End bp | 4399902 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646387858 |
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| Product | pentapeptide repeat protein |
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| Protein accession | YP_003267586 |
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| Protein GI | 262196377 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0671183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTTCA AGCAGAAGGA CCTCGCGAAG TTCAAGAAGG AACTCAACAG CGGGTCTGGT
CTTGCCGGCC TGTGGGCAAA GACGAACGAT CCGGACGATG TCGCCGTGCT CCACCTAGCG
ATGGTCACGT GCGCGTTTGG CTCAGCCCTA CACCGCTACT GGCGAACGCC GGCGATGGTG
CCAGAGAAGA GCCTCGAGGC CCTCGCGAAA CACGCAGGCA TTCGACTCGC CGATGACGGC
TCAGCAGACA AAGATGCCGT GGCGCGCTTG GCAAGGCTCT GCGGCAATCC GCTTAACACA
CCGTATTACT GCGCCCTGTG GGAGGCGCTC AACGACCCGG CCACCGATCT CGACGCACCG
ACCGAACCGA GGGAGTTCGA GAGCCACTTC CGCCGCGCGT ACTCGTTGGC GACCGCGACC
GACCAGGGAC AAATCGTCCA ACGCTGGCTG CTGAGCCTGG CCGATGAGAG CGTCGAGGTG
ATGCGGCGGA TTCTGGCCGA AGACCTCGCC GCCTGGGGCG AAAGGCACGT ATTCGGCAAC
GTCCGCAAAC AATCCAAGGG CGACCCCATG CCCTTCCTGG GATTGGATGC ATCGTACGTC
GAGCCGTACG GAGAGTACGA AGACGAGTTT AAACCCATCC TCAAACTCAT CGGCGAGCTG
CTCGAGAAGC AGAAAATCGT GGTGGTCTCG GCGGATTTCG GACACGGCAA GTCGCTCACC
GCCCGAAGAT TGGCCCGCGA CACAGCGCGC GCATGGCTGG AGAGCGACAC TCCCAGCCCA
CAGAACCGCT ACCCCGTGTT CATCAAGTGC GCCCGCGATA TCCGCGACGC CTCTTACAAG
CACGACGAGG TAGCCCGGCG CGCACTGTGG GAAGCGGCCA CGGAGGCTCT CGGTGAGGAG
TCTTCGAGTG AGGAGCCGCA GTTTCAACCA CCAGACAATC AGCATGCCGC ATTGTTCATC
CTCGACGGCC TGGACGAAGT CGCATTCTCG CCCAACCAAC TCGAAGACCT ATTCCGCAGC
CTGCGCGAAA AACTAGGCAA GCAGCAACGG GCTATCATCT TTACGCGCCC GAGCACTTTC
GACGACCGCC ACGGCCGCCC CGCAGAGAAC ATCCCTCTCA TATCTCTACT CCCATTCGAC
GAGTTGCAAA TCGAAGAATG GCTGACGCGT TGGAACAACA ACCCACAGTC CGAATCCGTC
AACATCGAGG AGTTGCGCGA GCATCAACCA ATTGCCGAGC TAGCCCACAC GCCCATCCTC
TTGCTAATGA TTGCGATGAC CTGGCAGGAA AGCCTAGCCA AAGGAGAAAT GCGCCGCGGA
GTTCTATACG AGCAGTTCTT CCGCCAAATC GCACGCGGTA AATACGAGAG CGACAGCGAC
AAACACCCGG TCATCCGTAA AGCGTCCGAA CTCATCGCCG ACCGCCTCAC CGAACTCAAA
TATCTCGATG CAAAGCAGTT CAGCGGCGAA GAAAGAAGTA TAGAGGCCAT GTTGTGGTTG
ATGTCGCGCA TAGCCTGGGA GGCGCACGCC TATGCGTACG AACCAGAGTT TGCCGAAGAT
GACCTCTCTG ACGGCGATAT CGAGCAATTG CTCAAAGAAG AGTTAAATAT TCGACGTGGC
AAGTCGCCTC TTCTACAAAT GGGGTTACTG CTTGCGTTAC AGTTCGATCC ATCAGGATCA
CAAACCACTG TGCTATTTGA GCATCAGTCT TTTCGAGAAT TCCTTGTTGC TCGATACTGG
CAGTCGCAAC TTTTATTCCT CACCGATCCA GAGAGAGACA GCGTAGAGAT CGAGCGAGCA
GAAAAGATAC TCGCCCAAAC GAGTCTTCTA CAAGACGACG ATCGCGCGTT CGATGCGCTC
ATCGAAGGGT TGCAACATCT TGAAGAGCCC AAACGCACGC AGATCAAAGA CTGGGCGGCT
CAATGTCTAA AAACAAGGTC CCTGACCGTC TCGCATATTC CTGACAAGGA GGACCGAGCA
CCGATCCTTC GAGAAAGTGC TTTGGCGATT GGCAGCACAA TCTTCGAAGA TAGCGGATTA
TCCATAGGCA TCCACGAGAT CCGATATTCA GCATTCTGGC ACGACTTTCA CAATCGCATC
CTACGCATCA TTGCTCCTAA CGTAAAAAGT CCCAAAAGCA ACCTCGCCAG AGTAGACCTC
GCCAGAGCCT ATCTCGCAGG CGCCGATCTC GCAGGCGCCG ATCTCGCAGG CGCCGATCTA
TCCCTTGCCC ACCTTGAGCG GGCCAGCCTT GAGCGGGCCA ATTTCCGCTC TGCCAAACTC
CTATATTCCA ATCTCCGATA TGCCGACCTC CGGCATGCCG GCTTCGAACA AGCCAACCTC
GTACAAGCCA ACCTCATACA AGCCAACTTC GGATACGCCC GGTTCCTAGG CGCAGATCTC
CGCGGCGCCC AGCTCCTAGG CGCCAACCTA CAAGACGCAA AACTTCAAAA TGCCAACTTA
CAAGGCGCCA ACCTACAAGG CGCCAACCTA CAAGGCGCAA AACTTCAAAA TGCCAACCTA
CAAGGCGCCG ACCTACAAGG CGCCGACCTC CGAGCCGCTA ACTTGTCCGC AGCGAACTTC
CTGGGAGCGC AGTATTCGAC GGAGACCAAA TGGCCAGACG GTGTCGATCC GGAAGCGCTT
GGGTGTATTT TCGTCGATTC GTCCGAGGCT GAATCGGATG CTCTCGATGA GTACGGCGAC
GAGGAAGCGT GA
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| Protein sequence | MAFKQKDLAK FKKELNSGSG LAGLWAKTND PDDVAVLHLA MVTCAFGSAL HRYWRTPAMV
PEKSLEALAK HAGIRLADDG SADKDAVARL ARLCGNPLNT PYYCALWEAL NDPATDLDAP
TEPREFESHF RRAYSLATAT DQGQIVQRWL LSLADESVEV MRRILAEDLA AWGERHVFGN
VRKQSKGDPM PFLGLDASYV EPYGEYEDEF KPILKLIGEL LEKQKIVVVS ADFGHGKSLT
ARRLARDTAR AWLESDTPSP QNRYPVFIKC ARDIRDASYK HDEVARRALW EAATEALGEE
SSSEEPQFQP PDNQHAALFI LDGLDEVAFS PNQLEDLFRS LREKLGKQQR AIIFTRPSTF
DDRHGRPAEN IPLISLLPFD ELQIEEWLTR WNNNPQSESV NIEELREHQP IAELAHTPIL
LLMIAMTWQE SLAKGEMRRG VLYEQFFRQI ARGKYESDSD KHPVIRKASE LIADRLTELK
YLDAKQFSGE ERSIEAMLWL MSRIAWEAHA YAYEPEFAED DLSDGDIEQL LKEELNIRRG
KSPLLQMGLL LALQFDPSGS QTTVLFEHQS FREFLVARYW QSQLLFLTDP ERDSVEIERA
EKILAQTSLL QDDDRAFDAL IEGLQHLEEP KRTQIKDWAA QCLKTRSLTV SHIPDKEDRA
PILRESALAI GSTIFEDSGL SIGIHEIRYS AFWHDFHNRI LRIIAPNVKS PKSNLARVDL
ARAYLAGADL AGADLAGADL SLAHLERASL ERANFRSAKL LYSNLRYADL RHAGFEQANL
VQANLIQANF GYARFLGADL RGAQLLGANL QDAKLQNANL QGANLQGANL QGAKLQNANL
QGADLQGADL RAANLSAANF LGAQYSTETK WPDGVDPEAL GCIFVDSSEA ESDALDEYGD
EEA
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