Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3182 |
Symbol | |
ID | 8545570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4383972 |
End bp | 4385369 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646387849 |
Product | DNA repair protein RadA |
Protein accession | YP_003267577 |
Protein GI | 262196368 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.540345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAGT CGCAGAAACG CCAGAAGACG CTCTACCGCT GCCAGAGCTG CGCCCACACC GAGACCCGGT GGATGGGCAA ATGCCCGGCC TGCGGCGAGT GGGGCACGCT GGTCGAAGAG GCCGTGGCCT CGGGTCGCGC GGCCAGCGCG AGCATCGCGG CACCGGACGA GGCGATGCCG GTGCGCGTCG ACCAGGTCGG CGCGCTCGAC GAGGCGGACG ATAAGCACAC GCGTCTGGCC TGCGGCATCG GCGAGGTCGA TCGCGTGCTC GGCGGCGGCT TGGTGCCCGG CGCCTTCGTG CTGCTCGGCG GCGACCCGGG CGTGGGCAAG TCCACGCTGC TGGTGCAGAC GCTCAAGGGC ATCGCCGACG CGGTGGCCGA GCGCGATGGC AGCGTGCTGT ACGTGAGCGG TGAGGAGTCG GTGCGGCAGA CCGCGATGCG GGCGCGGCGC GTGGATGCGG TGTCGCCGCA GCTCTCGCTG CTGGCCGAGA TCAACCTCGG CCGCATCCTC GAGCACGCCA AGCGCATGCA GCCCGCGGTA CTGGCCATCG ATTCGATTCA GACCATCTTC ACCGACGAGC TGGAGTCGAT CCCGGGCTCG GTGGGCCAGG TGCGCGAGTG CGCGGGCCGG CTCATGCACT TCGCCAAGTC CACGGGCATC CCGACCATCC TCGTCGGCCA TGTGACCAAG GGCGGGCAGA TCGCGGGCCC CAAGACCCTC GAGCACGTGG TCGACGCGGT CATCTACTTC GAGGGCGAGG GCGGCAGCCC GTATCGCATC CTGCGGGCGC ACAAGAACCG CTTTGGCTCG ACCCAGGAGA TGGGCGTCTT CGAGATGCGC GCCAGCGGTC TGTGCGAGGT GCAGAACCCG TCCGAGCTGT TTCTGGCCGA GCGTCCGATG GGTGCGCCCG GCTCGGTGGT CGTGGCCAGC GCCGAGGGCA GCCGGCCGAT TCTGGTCGAA GTGCAGGCGC TGGTCGCGCC GCCCTCGGCC GGGGTGGGAC GGCGTACGGC CGCGGGCGTG GACGGCAACC GCCTGGCGCT GCTACTCGCG GTGCTGGCGC AGCGCGCCAA CTGCGACGTG CTCAGCGAGG ACGTGTTCGT CAACGTGGCC GGCGGCTTGC GCGTGGCCGA GCCCGCGATC GATCTCGGCG TGGCCTGCGC GGTGGCGTCG TCGGCGCTGG GCAGGGCCGT AGACGCGCGC ACCGTGATGT TTGGCGAGGT CGGCCTCACC GGCGAGGTGC GGGCCGTGAA CTTCGCCGAC CTGCGCCTGG CCGAAGCCGC CAAGCTGGGT TTCCAGCGCT GCCTTCTGCC CAAGCAGAAC AGCCTGCGCC TCGAGGCCGA CCACGGTCTC GAGCTCATCG CCGTGAGCCG CCTCACCGAG GCGCTCGAGC GCCTCTGA
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Protein sequence | MSKSQKRQKT LYRCQSCAHT ETRWMGKCPA CGEWGTLVEE AVASGRAASA SIAAPDEAMP VRVDQVGALD EADDKHTRLA CGIGEVDRVL GGGLVPGAFV LLGGDPGVGK STLLVQTLKG IADAVAERDG SVLYVSGEES VRQTAMRARR VDAVSPQLSL LAEINLGRIL EHAKRMQPAV LAIDSIQTIF TDELESIPGS VGQVRECAGR LMHFAKSTGI PTILVGHVTK GGQIAGPKTL EHVVDAVIYF EGEGGSPYRI LRAHKNRFGS TQEMGVFEMR ASGLCEVQNP SELFLAERPM GAPGSVVVAS AEGSRPILVE VQALVAPPSA GVGRRTAAGV DGNRLALLLA VLAQRANCDV LSEDVFVNVA GGLRVAEPAI DLGVACAVAS SALGRAVDAR TVMFGEVGLT GEVRAVNFAD LRLAEAAKLG FQRCLLPKQN SLRLEADHGL ELIAVSRLTE ALERL
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