Gene Hoch_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3163 
Symbol 
ID8545551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4350586 
End bp4352871 
Gene Length2286 bp 
Protein Length761 aa 
Translation table11 
GC content76% 
IMG OID646387830 
Productserine/threonine protein kinase 
Protein accessionYP_003267558 
Protein GI262196349 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.923539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGACCG AGTGCGCTCG CGTCGGTTCC ATCCTCGAGA ATCGCTACCG CATTCTGGAG 
GTTCTGGCGC GGGGCGGGAT GGGCGTGGTC TACCGGGGCG AGCGCCTGGG GGTGAACCGC
CCGGTGGCGG TGAAGTTCCT GCACGCCAAC TTCGCCGCCG ACATGAAGGT ACGCGAGCGC
TTCGAGCGCG AGCTGCAGGC GATGAGCCGG CTCACCCATC CCAACTGCGT ATCGATCGTC
GACCACGGGA TCGCGGACTC GCCCTTCATC GTCATGGAGT TCATCACCGG GCGCACGCTG
CGCCACGCGC TGGTGCAGGC CGGGCGACTG CCGCCGCTGC GGGTCCTGTT CATCGCCAGC
CAGCTCCTGG CCGCGCTGGC ACACGCCCAC AGCCAGGACA TGATCCACCG CGACATCAAG
CCGGGCAACA TCATCTTGGC CGACGTCGAG GGCACCCTCG ATCACGTCTA CGTGCTCGAC
TTCGGCCTGG CCAAGTTCCT GAGCTGCGCG GGCGAGGACG ACCTCACCGC CACCGGCATG
CTGCTCGGCA CGCCTTCGTA CATGGCGCCC GAGCAGGCGC GCTCGACCTC GGTGGGCGCG
GCCACCGACA TCTACTCCAC GGGCGTGGTG CTGTTCGAGC TGCTCACCGG CAGCAAGCCC
TTTGCCGCCG ATCATCCGCT CGACATCATT CATCAGCACC AGTTCGCGCC GGTGCCGAGC
ATCCGCGAGC GCGCGCCCGA GGCCGGGTTC TCCGAAGAGC TCGACCGCGC CGTGCAGACC
GCGCTGGCCA AAGATCCCGG CGACCGCTTC GGCTCGGCCT CGGTGTTTGC GCGCGTCCTC
GACCAGGTGC CCGAGGCCGC CGACGTGCGC ACCAGCACCC GGCTGCGCGC GCTCACGCCG
CCCGCCGCCG TGCCGCCCGC GCCGGCCGCG GCGCCTGCGC CGGCTGCTGC GCCCGCGGTG
CTGTCGCCGC CGGAGACGCT GCCGGGTGCG GCCCAGGCGC CGCCAGCGGC GGCCGCGGAC
CCAGCCCGGG CTGAGCCTGC GGCCGCGGCG CCAGCGCCGA CCCCGGCCGA GCCTCCGGCC
GCCGCCCGGG CAGCGGCTCA GGCCGCACGC GAGGCCGAGC CGACCGAGGC CGACGAGATC
GCGACCCCGG ACGCGGCCCC GCCCGTGAAC CGGCCGGGTG AGGTCGATGA CACGGATGTC
GGCGTCGCCG CAGCCCCCGC GGCGCCCGGG GCGGAGCCGG CACCGGGGGC CGCGGGCCGC
TCGCACATCT CGACCTTGGT CCCGGGCCGG CTGCGTCCGC GCGCTGCCGG GTCCGCCGCT
CAGCCGGCGC CGTCCGCGGC CGCGCGGGCG CGATCGGGGC GCGGCGGCTG GCTGCTGGTG
GCGGCCGGCG CGTTGGCCGC GGTCGCGGTG ATCAGCGGCT GGTGGGCGAG CCGCGGCGAC
GCCATCGAGA CCGCGTCCGA GACCGCGGCG CGGCCCTCCG GCGTGCAGGT CGCGGGCACC
GGCACGCCCA CGGGCTACGC GCTGGCGCAG GCGGCGGTGG CGCCAGCGCC AGCGCACGCC
GAGGCCGAGA ACGGACGCCA GGACGAGGCC GCCGCCGTCG CCGAGCAGGC GGGCGCGGGC
GCGGACGCGG ACGCCGAGCC GCGCGAGCCG CCGGCCGCGG CCGCCGACAT TGCCGAGGCC
GAGGCCGAGG CCGAGGCCGA AGCAGACGCC GCCGGTGCTG CCGAGGACGA CGCCGCGAGC
GCGCTCGCGA GCGCGCAGGC GGCCGACAGC GAGGCCGAGG CTGAGGGCCA GGACGAGAGC
CGCGCCGAAG CCGCGCAGCG CCAGGCCGCG GCCAGCGCCG CGCGCGCTCC TCCGCGCCGG
CGCTCGGCCG TCGCCGCGCC GCCCGAGACC ATCGCCGACA TCGAGCGCCT GGTGCAGCAG
GGCCGCCGCG ACCAGGCCAT CGCCGGCATC GAGGCGCTGC GCAGCAACGC GTTCACGCGC
AGCGGCTACC TCGCCTACCT GCTCGGCAAC CTGTACTTCG AGAAGCAGCA GTGGACCAAG
GGCCTCGCCG CCTACGACGA CGCCCTGCGG CTCAAGTCCG ACTACCGGAC AAACGCGCTG
CTCAACAGCA ACGCCATCCA GGCGCTGTCG CACCGGCGCA CCTGGCGCGC GGCGCAGAAT
CTCTACCTGC GCCGCATCCG CAGCGGCGGC GCCCGCTATC TGCGCGAGGC CGCGGCCTCG
CATGCGAGCA AGCAGGTGCG CCAGCGCGCC GGCGCGCTGC ACGCTCGCGT CACCGGCCGC
AAGTAG
 
Protein sequence
MPTECARVGS ILENRYRILE VLARGGMGVV YRGERLGVNR PVAVKFLHAN FAADMKVRER 
FERELQAMSR LTHPNCVSIV DHGIADSPFI VMEFITGRTL RHALVQAGRL PPLRVLFIAS
QLLAALAHAH SQDMIHRDIK PGNIILADVE GTLDHVYVLD FGLAKFLSCA GEDDLTATGM
LLGTPSYMAP EQARSTSVGA ATDIYSTGVV LFELLTGSKP FAADHPLDII HQHQFAPVPS
IRERAPEAGF SEELDRAVQT ALAKDPGDRF GSASVFARVL DQVPEAADVR TSTRLRALTP
PAAVPPAPAA APAPAAAPAV LSPPETLPGA AQAPPAAAAD PARAEPAAAA PAPTPAEPPA
AARAAAQAAR EAEPTEADEI ATPDAAPPVN RPGEVDDTDV GVAAAPAAPG AEPAPGAAGR
SHISTLVPGR LRPRAAGSAA QPAPSAAARA RSGRGGWLLV AAGALAAVAV ISGWWASRGD
AIETASETAA RPSGVQVAGT GTPTGYALAQ AAVAPAPAHA EAENGRQDEA AAVAEQAGAG
ADADAEPREP PAAAADIAEA EAEAEAEADA AGAAEDDAAS ALASAQAADS EAEAEGQDES
RAEAAQRQAA ASAARAPPRR RSAVAAPPET IADIERLVQQ GRRDQAIAGI EALRSNAFTR
SGYLAYLLGN LYFEKQQWTK GLAAYDDALR LKSDYRTNAL LNSNAIQALS HRRTWRAAQN
LYLRRIRSGG ARYLREAAAS HASKQVRQRA GALHARVTGR K