| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3141 |
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| Symbol | |
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| ID | 8545529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4317121 |
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| End bp | 4321341 |
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| Gene Length | 4221 bp |
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| Protein Length | 1406 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646387808 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003267536 |
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| Protein GI | 262196327 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.367834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.195519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACGA ACGAGCAGAC AGAGACGCCC GCGCTGGCGT TTCTCGCTGG CGGCGGTGAG
ATGGGCGAAC GCATGCGCGC GTTCGACTGG TCGCAGAATC CGCTGGGCGA GCCGGCGGAG
TGGTCCAACA GTCTCAAGAC CGCGGTGCGC ATCATGCTGA CCTCGCGGCA GCCGGTCTGG
ATCGGGTGGG GGCCGGAGCT GATCCATCTC TACAACGACC CGTGCAAGGC CATTGTCGGC
GGTAGGCACC CGGACGCGCT CGGGCAAGCG CTGCGCGAGG TCTGGTCCGA ACTCTGGGAC
GATATCGGCC CCATGCTGGA TCGGGCGATG CGCGAGAACG AGGGCGTCTA TCTCGAGTCG
GAGCTCTTCA TCATGGAGCG CCACGGCTAC CGCGAGGAGA CCTATTACAC GTTTTCGTAC
AGCCCGATTC CCGAGGACGA TGACGGCGGC GCCGGCGGCA TTTTGTGCGC CAATACCGAC
GATACCCAGC GCGTGATCGG CGAGCGTCAG CTCGCACTCT TGCGCGAGCT GGCGGCGCGC
ACGGCCGACA CCCGTACCTG GCAACAGGCG TGCGAGCGCG GCGCGGCCGC CTTCGCGCAC
GATCCGCAAG ATCTGCCCTT CGCGTGCATC TACCTGCTGC GCGACGATGT CGTGGAGCTG
GCGGCGTGCA GCGGTATCGA GGCCGGACAC GCGGCCGCGC CGCTGCGGCT CGAGCGCGGC
GCCGATGCGC TGTGGCCGGT GCGCGAGGCG CTGAGCTGCG GCGACATCCT GGTCGAGGAC
ATCGCCGGGC GCTTCGATGC GTTGCCGCGC GCAGCCTGGC GCGTGCCGCC CAGCCGCGTG
GCCATCGTGC CCATGGCCAC GGCCGGGCCG GCTGCGCCTT CGGGCGCGCT GGTGGTCGGC
CTGAGTCCGC TGCGCGCGCT CGACGATGGC TATCGCCGGT TTTTGGGACT GGTGGTCGGG
CAACTCGCGT CCGGCATCGC CAGCGCCCAG GCCTACGACG AGGCGCGCAT GCGCGCCGAG
GCCTTGGCCG AACTCGACCG CGCCAAGACC GCGTTCTTCT CGAATGTGAG CCACGAGCTG
CGCACGCCGC TCACGCTCAT GCTCGGCCCG CTCGAGGAGG CGCTCGCGCG GCCCGCGCAC
GGTCTCGACG CCGCGCTGCG GGAGGACCTC GAGATCGTCC ACCGCAACGG GCTGCGCTTG
CGCAAGCTGG TGGGCACGAT GCTCGACTTC TCGCGCATCG AAGCCGGGCG CATGCAGGCG
CGCTTCGAGC CGATGGCGCT CGCGAGCTTC ACGGCCGAGC TGGCCAGCGT GTTTCGCTCG
GCCGTCGAGC ATGCCGGCCT GCGCCTGGAG ATCGACTGCC CGCCGCTGTC CGCGCCGGTG
TACGTCGATC GCGAGCAGTG GGAAAAGATC GTGCTCAACC TGCTGAGTAA CGCGCTCAAG
TTCACGCTCG AGGGCGAGAT CCGGGTGTCG CTATGCGAGC GCGAGGACGC GGTCGAGCTG
GCGGTGAGCG ACACCGGCGT GGGCATTCCC GAGGATCAGA TCGAGCGCGT GTTCGAGCGC
TTCCACCGGG TCGCCGACGC GCGCGGACGC TCCCACGAGG GCACCGGTAT CGGCCTGTCG
CTGGTGCGCG AGCTGGTGCA CCTGCACGGC GGCACGGTGC GCGTCACCAG CGAGCTCGAC
CGCGGCAGCG TGTTCCTCGT GCGCCTGCCG CTGGGCGCAG CCCATCTCGA TTCCGCGCAG
GTGGTCACGG CGCAGCCCGC GTCCGGGGAG TCCGTCCACC TGGACGCATT CCTCGGCGAG
TCCATGCGCT GGCTGCCGTC GCGTACCGGG GGGGCGGCGG CGGACGTGCA GGCCATCGCC
GCGACTCCGG CGGACGCAGG GCATACGGCT GCGCTGCCGC GCGTGCTGCT GGCCGACGAC
AACGCCGATA TGCGCGCGTA CGTCGGCCGT CTCCTGTCCG AGCGCTTCGC GGTCGAGGCC
GTGCCCGACG GCCGCAGCGC GCTCGAGGCG GTGCGTGCGC GTCCGCCGGA GCTGGTGCTG
GCCGACGTGA TGATGCCGCA GCTGAGCGGC TTCGAACTGC TGGCCGCGAT CCGCGACGAC
CCGGCGATTC GCGATACGCC CGTGATCCTG CTGTCGGCGC GCGCGGGTGA AGAGGCGCGC
GTCGAGGGGA TGGACGCCGG CGCCGACGAT TACCTGACCA AGCCCTTCAG CGCGCGTGAG
CTGCTGGCTC GGGTGTCGGC GCACGTGCAG ATGTCGCGCA TGCGCCAGGA GGCCAACGCG
GCCCTGCTCG CGGAGCAGGC GCGGCTGCGG CTGGCGCTCG AGACCGGACG CCTGGGCGCC
TGGCAGGTGA ATATCGCGAC CCGCGAGCTG CGCTGTAGCG CGCAGTGCCG CGTCAACTTC
GGCGTCGCCG AGGACGTCGC GGACGACGAG CTCGACATCG ATATGCTGAT GGGCGCGCTC
GACCCCGACG ACCGCGAGCA CCTGCGCGCG CAGGCGCGGC GCGCGATCTC CCTCGGCGGG
GACTACGACG GCGAGTATCG CGTGGTCTGG TCCGATCGCA GCGTGCACTG GCTGGCAGTG
CGCGGCCGCG CGCTCTACGA CGAGCACGGC AGGCCGACCC ACGTCATGGG CGTCTCGCTC
GACGTCACCG AGCGCAAGCA CGCTCAGCAC GCGCTCGAGG CCCGCGAGGA GTGGTTCCGC
ACCATGGCCG ACACCGCGCC GGCGTTGCTG TGGGTGACCG CGCCCGACGG TAGCTGCACC
TTCCTGTCGC GCCGCTGGTA CGAGTTCACC GGTCAAGGGG AGGGCGAGGC GCTCGGCAGC
GGCTGGCTGC AAATCGTCCA CCCGGACGAT CGCGCCCGCG CCATGACCAT CTTCCTCGGC
GCCAACGGCG AGCAGCGGCC CTTTGCCCTC GATTATCGCC TGCGGCGCAA GGACGGCAGC
TACCGCTGGG CCATCGCCGC GGGGCGACCG CGCTTCTCCG ACGACGGCGC CTTCCTGGGC
TACGTGGGCT CGGTCATCGA CGTGCACGAG CGCAAGCAGG CCGAGGAGGC GCTGCGCGAG
GCCGATCGCC GCAAAGACGA GTTTTTGGCC ACGCTGGCGC ACGAGCTGCG CAATCCGCTG
GCGCCGCTGC GCACCGGGCT CGAGCTGCTG AGCGTGGCGG GGGCGGACGC GGCCGAACAG
GCGCGCACGC TCGACATGAT GACGCGGCAG GTGAGCCATA TGGTCCGCCT GGTCGACGAC
CTGCTGGACA TGAACCGCAT CCGCCGCGGC AAGATCCAGC TCAAGCGCGC GCGGCTCGAG
CTGTCGCCCC TGGTCGCGCG CGCGATCGAG GCGACCAGGA CGGTCTGCGG GCGCGCGGGC
GTGACCCTGG TGGCGCCGCC GGCGACCGCG ATCGAGGTGC ACGCCGACGC CGACCGCATC
TTGCAAGTGG TGCACAATCT GCTGCACAAC GCGTGCAAGT TCACGCCGTC TGGCGGCGAG
GTGCAGGTGT CGGTGCGGCG CGAGGGCAGG GACGCGGTGG TGTGCGTGCA GGACTCGGGC
ATCGGCATCG ACCGCGCGCA CCTCGACGGG ATCTTCGAGA TGTTCGCCCA GGTCGACGCC
GGCAACGCGG GCTCGGGCGG CGGCCTCGGC ATCGGGCTCA CCCTGGTCAA GAGCTTCGTC
GAGATGCACG GCGGCAGCGT GAGCGCGGCC AGCGAGGGCC TGGGGCAGGG CAGCGTGTTC
ACGATGCGGC TGCCGGCGCT CGACCCGCTC GCCGCCGAGC CGCCCATCGC CGCGCCGTGT
GCCGCAGCGC CGCGCGCGTC CGTGTCCGTG TCCGCGGGCG CGCGCGGGCG CGGAGCGGCG
CAGGCGCCGG ACGCCGCGTC GCTGCGCATC CTGGTGGTCG ACGACAACCG CGACGCCGCC
GACACCCTGG AGACACTGCT CTCGTATTCT GGACACTCGG TCAAAGTCGC CTTCGACGGC
TTGCAGGCGG TCGAGGTGGC CGAGGCGTTT CGCCCCGAGG TCATCCTGCT CGACATCGGC
CTGCCGCGCA TCGACGGCTA CGAGGCCTGC CGGCGTATCC GCGCGCAGCC CTGGGCCCGC
GACGCGACCC TGGTCGCGCT CACCGGCTGG GGCCAGCGCG AGGACCGCCG CAAATCCGCC
GAGGCCGGCT TCGACCGTCA TCTGGTCAAG CCGATCAGCA GCGCGACCCT GCTCGAGGCC
ATCGCGCCGG GCAAGCCGTA G
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| Protein sequence | MPTNEQTETP ALAFLAGGGE MGERMRAFDW SQNPLGEPAE WSNSLKTAVR IMLTSRQPVW
IGWGPELIHL YNDPCKAIVG GRHPDALGQA LREVWSELWD DIGPMLDRAM RENEGVYLES
ELFIMERHGY REETYYTFSY SPIPEDDDGG AGGILCANTD DTQRVIGERQ LALLRELAAR
TADTRTWQQA CERGAAAFAH DPQDLPFACI YLLRDDVVEL AACSGIEAGH AAAPLRLERG
ADALWPVREA LSCGDILVED IAGRFDALPR AAWRVPPSRV AIVPMATAGP AAPSGALVVG
LSPLRALDDG YRRFLGLVVG QLASGIASAQ AYDEARMRAE ALAELDRAKT AFFSNVSHEL
RTPLTLMLGP LEEALARPAH GLDAALREDL EIVHRNGLRL RKLVGTMLDF SRIEAGRMQA
RFEPMALASF TAELASVFRS AVEHAGLRLE IDCPPLSAPV YVDREQWEKI VLNLLSNALK
FTLEGEIRVS LCEREDAVEL AVSDTGVGIP EDQIERVFER FHRVADARGR SHEGTGIGLS
LVRELVHLHG GTVRVTSELD RGSVFLVRLP LGAAHLDSAQ VVTAQPASGE SVHLDAFLGE
SMRWLPSRTG GAAADVQAIA ATPADAGHTA ALPRVLLADD NADMRAYVGR LLSERFAVEA
VPDGRSALEA VRARPPELVL ADVMMPQLSG FELLAAIRDD PAIRDTPVIL LSARAGEEAR
VEGMDAGADD YLTKPFSARE LLARVSAHVQ MSRMRQEANA ALLAEQARLR LALETGRLGA
WQVNIATREL RCSAQCRVNF GVAEDVADDE LDIDMLMGAL DPDDREHLRA QARRAISLGG
DYDGEYRVVW SDRSVHWLAV RGRALYDEHG RPTHVMGVSL DVTERKHAQH ALEAREEWFR
TMADTAPALL WVTAPDGSCT FLSRRWYEFT GQGEGEALGS GWLQIVHPDD RARAMTIFLG
ANGEQRPFAL DYRLRRKDGS YRWAIAAGRP RFSDDGAFLG YVGSVIDVHE RKQAEEALRE
ADRRKDEFLA TLAHELRNPL APLRTGLELL SVAGADAAEQ ARTLDMMTRQ VSHMVRLVDD
LLDMNRIRRG KIQLKRARLE LSPLVARAIE ATRTVCGRAG VTLVAPPATA IEVHADADRI
LQVVHNLLHN ACKFTPSGGE VQVSVRREGR DAVVCVQDSG IGIDRAHLDG IFEMFAQVDA
GNAGSGGGLG IGLTLVKSFV EMHGGSVSAA SEGLGQGSVF TMRLPALDPL AAEPPIAAPC
AAAPRASVSV SAGARGRGAA QAPDAASLRI LVVDDNRDAA DTLETLLSYS GHSVKVAFDG
LQAVEVAEAF RPEVILLDIG LPRIDGYEAC RRIRAQPWAR DATLVALTGW GQREDRRKSA
EAGFDRHLVK PISSATLLEA IAPGKP
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