| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2936 |
|---|
| Symbol | |
|---|
| ID | 8545324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3999475 |
|---|
| End bp | 4001754 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646387618 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003267346 |
|---|
| Protein GI | 262196137 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.822223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG CCACCGCCAT CATCCCCACG ACGGGCCAGC GGCCGGCGCT GCTCCGTCGG
GCGTTGGCCT CGGTGCACGC GCAGACCCTG GCGCTGCGTG CGGTCTTGGT CGTGGTCGAC
GGGGACGATG TCCAGGCGTC CGAAGTCCGC GACCAGCTCG ACGGGCTGGC CGCTGAGGTG
ATCGCCGTGG GCACGCGACG CGGCGCCGGG GCTGCGCGCA ATCACGGCGC CCGACACGCG
CGCACGCGGC ATCTGTGCTT CCTCGACGAT GACGACGTAT GGAAACCCGA CTACCTCGCG
GCCGTGTTCG CGGCGGGGCC CGACTTCGAC CTTGCACTGA CCGCCTTCGA GAAGCACACG
GTCGCAGGAG CACGGCCCGA AAAAGTGCCG CCCGTCGCGC TGTGCGCCGA CGCGTTCCTG
GTCAAGAATC CGGGCCTGCG CGGCAGCAAT CTCGTGCTCA CCCGGTCCTT GTACTGGGCG
GCTGGCGGGT TCTCCGAGGC GCTGCCGGCG CTGAACGACA TGGACTTTGG CCTGCGCCTG
GTCGCCGCCG AGGTCGGGCG CTATCGTCGT GTCGTCGACC CGCTGGTCGA GTACCATGCG
CACGACGGCG AGCGGCTGTC CGGGCGCGGC GCGCGCGCCA TCCCGCCGGG ACTCAGCGGT
TTCCTCCTGC GCCACGGGCC GCGTATGGAT CACCGCCAGG AGGCGGCGTT CCGCGCCCGC
GCGCTCGCGC TCTGGGGGGT CGATCCCTGG GCGCTCGCGG CGCTCGCGCA GCGCTTTGAC
GAGGCGCGCG CTCAGGGGAC GCTGGCCGCG CACTTCCCGG GGCTGTTGCA CGCGGCCGAA
ACCGCGCTCC TCGAGGCCGC GTGCCAGAGC GATGCCCAAG CAGACGCCTA CCAGGCGTTC
ATCGATCGTC TGTGTCACGC ATTCGAGGAC GTCGCCGACA GCGCGCAGCG TGTGCGTACG
CTGCGTGTCG TGGTCATCAC CACGGACACA CCGGACAGCG TCGCCGGCCT GCTGAGTTCG
CTGGTCCAGA TGCTCACGCG CTCGCGCTGG CGTCACGCGC ACACCGGCCC GCTGGTCGAG
CTGCTGCTGG TGCGTAACGA CGCCGACGCC GAGATCGCGG CCGCCCACGA CGCGGTGCTG
CGAGGCTGGG ACGATCCGCG GGTCGCGGTG TCCGAAAAAA ACGTGCCCGC GGCCGCGCGC
CCGCTGTCGC TCACCGAGGC GCGGATCCAT GCGTTTCGCG CGGCGCGGAC ACGCGGCTGG
TGTCCCTCGC CCGAGGCGCC GGTGTGGTTT CTCGACGAGG ACTTCCGCTT CGAGGTTCTC
GTCCCGTCGG TCGAGCGCTG GTACCGACAG GTTCCGGGCG GCTCGCCGCT CCATCGGCTC
GAGTGTTTGG CCCTGCGCCT GGGCGCGGCC GGCGTGGACG CGCTCGTCTG CGGCAACAGC
GGCGCGCCCC CGGTGCCCGC GCTGGGGACC ATCGGGCGAC AACTCGGCGA TCTCATGTCG
TTGACCGCGG AGGCGCAGCC GTTGCGGCGC GATGTGCTCG CGGCGCTGCT CGAACGGCCT
GATCCGTACT ACGATCTTTC GCGCGATCTT CGAGATGATC TGCGCGCGCC GGTCGCGACC
ACCTGGTGGC GGGATCTCGG GCCGTTGCGT TGGGACGAGG TCGGGACGCG GCTGCTGGGC
GGCTTGCCGG TCACCCGTCC AGCGTTGCCC TCCCTGCACG AGCAGCCGGC GAGCGCCTGG
GGACATCAGA CGCCTGCCGC GGTCGCGGGC GGCAACACAG TCTTGCTCTC GATGCGCGTA
CTGCGCCCGG AGCGCTTTGC ACAGGTCGAG TGGCGGGGCG TTCGCTCGCG GCGCGGCGAC
ACGGTCTGGT GTCTGCGCTG TCAGCGTGAG GGCGCGCGCA TCGTCTGCGC CTCCCTGCCG
CTCTTGCACG CACGCGTCCC CCGGCGCGGC CCGTCTGGCT TCGATCGCGC CCTGCGCGAT
GCCCTCTCCG ACGCCCTCGG GGTCGGGCTC TACGAGACCA TCGCAGCGGG CGAGGGTCTC
GACGTGTCGG CGATCGAGCG GCGAGCAGCC CACCGACTCG CCGCGCTCAC CGACAACCTC
GCGAGCGCGG CCGACGCCTT GCGGAACACC GATGAGGCCA TCTTAGCGGC CCCGCTGCGT
GTGTTGGAGG GCGATTTGCG GGCGCTGTGC GCGTCGCTGC GGGACGCAAA AATCGTCGGC
GTGCACGTTG TCGGTGAACG CAGCGCCGAT CTCGAAGGCT TCTTGACGGT CAGCGTGTAG
|
|---|
| Protein sequence | MIDATAIIPT TGQRPALLRR ALASVHAQTL ALRAVLVVVD GDDVQASEVR DQLDGLAAEV
IAVGTRRGAG AARNHGARHA RTRHLCFLDD DDVWKPDYLA AVFAAGPDFD LALTAFEKHT
VAGARPEKVP PVALCADAFL VKNPGLRGSN LVLTRSLYWA AGGFSEALPA LNDMDFGLRL
VAAEVGRYRR VVDPLVEYHA HDGERLSGRG ARAIPPGLSG FLLRHGPRMD HRQEAAFRAR
ALALWGVDPW ALAALAQRFD EARAQGTLAA HFPGLLHAAE TALLEAACQS DAQADAYQAF
IDRLCHAFED VADSAQRVRT LRVVVITTDT PDSVAGLLSS LVQMLTRSRW RHAHTGPLVE
LLLVRNDADA EIAAAHDAVL RGWDDPRVAV SEKNVPAAAR PLSLTEARIH AFRAARTRGW
CPSPEAPVWF LDEDFRFEVL VPSVERWYRQ VPGGSPLHRL ECLALRLGAA GVDALVCGNS
GAPPVPALGT IGRQLGDLMS LTAEAQPLRR DVLAALLERP DPYYDLSRDL RDDLRAPVAT
TWWRDLGPLR WDEVGTRLLG GLPVTRPALP SLHEQPASAW GHQTPAAVAG GNTVLLSMRV
LRPERFAQVE WRGVRSRRGD TVWCLRCQRE GARIVCASLP LLHARVPRRG PSGFDRALRD
ALSDALGVGL YETIAAGEGL DVSAIERRAA HRLAALTDNL ASAADALRNT DEAILAAPLR
VLEGDLRALC ASLRDAKIVG VHVVGERSAD LEGFLTVSV
|
|---|
| |