| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2706 |
|---|
| Symbol | |
|---|
| ID | 8545093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3727367 |
|---|
| End bp | 3728536 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646387399 |
|---|
| Product | cytochrome c oxidase, subunit II |
|---|
| Protein accession | YP_003267128 |
|---|
| Protein GI | 262195919 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.363999 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGC TCAACGAGAC CCTGCGCACG CTGCTGTTTC TGCCCGAGCA GGCCTCGAGC
GTGGCCGGCG AGATCGACGC CCTGCACTAC GTCGTCATCC TCACCAGCCT GCTCGGCAGC
GCGGCCGTGA GCGCGGCCGT GCTGTACTTC CTGGTGCGCT ACCGGCGCTC GGCCCAGGTC
GCCGCCGCCG ACAGCGACGC CGACAGCGAC GCCGACAGCG CGGCGCAACA CGCGGACGTC
CGTCCGGCGC CGTCGCGCCG TCGCGGTATG CCGCTGGCGC TCGAGATCGC GGTGGTGCTC
GGGCTGCTGG GCATGTTCGT GGGCTGGTGG GTCATCGGCT TTCGCCAGTT CGTGAACCTG
CGCACCGCGC CCGAGGACGC CATGCGCGTC TACGTCACCG GCAAGAAGTG GATGTGGTCG
TTCGCGTATC CCGACGGCCA GGCGTCCAAC GCCGTGCTCT ACGTGCCGGC CGGACAGCCG
GTCGAGCTCC TGCTCAGCTC GCGCGACGTC ATCCACAGCT TCTACGTGCC GGCGTTTCGC
CTCAAACACG ACGCGGTGCC CGGGCGCATG AACTCGATGT GGTTCGAGGC CGAGAAGCCG
GGCGTGTATC CGATCTTGTG CGCCGAATAC TGCGGCGACG GCCACGCCAC CATGCGCGGC
CAGGTGGTGG TGCTCGCGCC CGCCGACTAC CAGGCCCAGC GCGGACTGGC GCCGGGTGAA
CAGGCGGGCC CGGCCGGCGC GCTGGCCGCG GGCGACAGCA TGGCGGCCCA GGGTGAGCGC
CTGGCCACGC GCCACGGCTG CATGCGCTGC CACACGGCCG ACGGCACGCC GCACATCGGC
CCCAGCTTCG CGCGCGTCTA CGAGCGCGAG CTGCCGCTGG TCGGCGGGGC CACGGTGCGC
GCCGACGAGG CGTATCTGAC CGAGTCGATG ATGGATCCCC TGGCGCGCGT GCGCCGCGGC
TTCCAGCCGG TGATGCCCTC GTATCAGGGC CTCCTGAGCG CGCCCGAGAT CGCCGCTATC
GTCGAATACA TCCGCTCGCT GCGCGATGTG CCGCCGAGCC CGCCGGCGCC GCCGCCAACG
GGCCCGCTGC AGTGGCCGAC GCCGGCCCAG CAGGGCGACG CCGACGCGCC CGCGGTTCTC
GACCCACTGG ACGAAGAAGG CGCGCCGTGA
|
|---|
| Protein sequence | MSWLNETLRT LLFLPEQASS VAGEIDALHY VVILTSLLGS AAVSAAVLYF LVRYRRSAQV
AAADSDADSD ADSAAQHADV RPAPSRRRGM PLALEIAVVL GLLGMFVGWW VIGFRQFVNL
RTAPEDAMRV YVTGKKWMWS FAYPDGQASN AVLYVPAGQP VELLLSSRDV IHSFYVPAFR
LKHDAVPGRM NSMWFEAEKP GVYPILCAEY CGDGHATMRG QVVVLAPADY QAQRGLAPGE
QAGPAGALAA GDSMAAQGER LATRHGCMRC HTADGTPHIG PSFARVYERE LPLVGGATVR
ADEAYLTESM MDPLARVRRG FQPVMPSYQG LLSAPEIAAI VEYIRSLRDV PPSPPAPPPT
GPLQWPTPAQ QGDADAPAVL DPLDEEGAP
|
|---|
| |