Gene Hoch_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2446 
Symbol 
ID8544833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3375352 
End bp3376032 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID646387146 
Producttranscriptional repressor, LexA family 
Protein accessionYP_003266875 
Protein GI262195666 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.575713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACG CGCTTACATC ACGCCAGCGA GAAATCCTAG ATTTCATCAC CGACTTCATC 
CAGGAACGGG GCTACCCGCC CACGCTGCGC GAGATTGGCG AGCACTTTGG CATTCGTTCG
ACCAACGGGG TCAACGATCA CCTCAAAGCC CTCGAGAAAA AAGGCTATCT CCGCCGCGAA
GACCTCAAAT CGCGGGCCAT GTGGCCGGTC CAGGTACCGC CCGAGCACGA GACCGAGAAC
CGCGGCAAGG TCATCCCGCT GCGCAAGAAC GTCGAGGAGG ATGCGGTCGT CGATATCCCC
ATCCTGGGCC GCGTCGCCGC CGGGCTGCCG ATCCTGGCGG TGGAGAACGT CGAGGATCGC
GTGCGCGTGG ATCGCTTCTT CCTGGGCACG CCGCCGCAGC AGCTCTTCGG CCTGCGCGTG
GTCGGCGAGT CGATGATCGA GGACGGCATC CTCGACGGCG ACTATGTCTT CGTCAAGAAG
ACGCCGACCG CCCAGCCCGG CGACATCGTG GTCGCCATGA TCGAGGAGGA GGCCACGGTC
AAGCGCTACT ACCCCGAGCG CGACTCCATC CGCTTCGAGC CAGCCAACTC GAACATGCGG
CCCATCGTGG TCAAGAAGAG TGATTTTCGC GCTGTCGATC TGCTTGGCGT GGTGGTCGGG
GTCTATCGTA AGCTCCGCTG A
 
Protein sequence
MPDALTSRQR EILDFITDFI QERGYPPTLR EIGEHFGIRS TNGVNDHLKA LEKKGYLRRE 
DLKSRAMWPV QVPPEHETEN RGKVIPLRKN VEEDAVVDIP ILGRVAAGLP ILAVENVEDR
VRVDRFFLGT PPQQLFGLRV VGESMIEDGI LDGDYVFVKK TPTAQPGDIV VAMIEEEATV
KRYYPERDSI RFEPANSNMR PIVVKKSDFR AVDLLGVVVG VYRKLR