| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2425 |
|---|
| Symbol | |
|---|
| ID | 8544811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3352018 |
|---|
| End bp | 3352998 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646387124 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003266855 |
|---|
| Protein GI | 262195646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.457545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTTT CCTGCGGCGG CGCGGGCGGA CTTCCGTCCC GTCCGGGCGC GGCTGGCGCC
GGCGGCAGCG GTGGCGCCAA GGTCAATCCC AACGCCTGCG GCGGCATCGC CGAGGTCGAC
ATCGGCCGCC GCATCCAGGC GTTCCTGAAT GCCACCGTGC AGCTTCAGGA GGCCGTGTAC
GGCATCGAGA CCTACGTCCG TGACACCTGC GGCGAGATGG GCAGCACCCT CGGCGCCGAC
ACCTCGGGTA GCACCACGGC CGAGGTATGC AACGCCACCG CCGAGGCGCT GCGCGGCAGC
CTGAGCGTGG GCCTCGAGGC CCAGGCCCGC CTCGACATCG AGTACCAGCC CGCGGTTTGC
CAGGTCGACG CCAGCGTCGC CGCCCGCGCC ACGGCCGAGT GCGAAGCCAA GGCCGAGGCC
GATGTTCAGG TCACCTGCTC GGGCACCTGC TCGGGCACCT GCGCCGGCGC CTGCGATGGC
GAGTGCGTCG GCGGCACCGC CGGCGGTGAG TGCAACGGCG AGTGCCGCGG CGAGTGCCGT
GGCGAGTGCC GCGGCGAGTG CCAGGGCAGC GCCGACGTCC AGGCCGAGGC CACCTGCGAG
GCGTCTGCCG AGGTTCGCGC CAACGCCGAG GTGGAGTGCA CCGAGCCCGA GCTGCGCGTG
GACTACGACG CCGCCGTGGT CGCCGACGCC TCCAAGCTCG AGGCCGCGGT CGAGGCCGTC
AAGTACGGCA TGCCGCGCCT GCTGGTCGCC CACGCCAAGC TGACCGGTCC GGTGCAGCAG
GCCGTCAAGG TCTGGGTGCG CACCGCCACC GACCTCAGCA AGTCCGGCGC CGGCGCCTTC
AAGGCCCTGG GTGCGCAGGC CATGTGCGTG TCCGGTCAGG TCGCCGCCGC CTTCGCCGCG
GTCGCCGACG TCCAGGCCTC GTTCTCGGTG AGCGTCGAGG CTTCGGTCAG CGTCAGCGGC
GCGGCCGGCG CCTCGATGTA A
|
|---|
| Protein sequence | MLFSCGGAGG LPSRPGAAGA GGSGGAKVNP NACGGIAEVD IGRRIQAFLN ATVQLQEAVY
GIETYVRDTC GEMGSTLGAD TSGSTTAEVC NATAEALRGS LSVGLEAQAR LDIEYQPAVC
QVDASVAARA TAECEAKAEA DVQVTCSGTC SGTCAGACDG ECVGGTAGGE CNGECRGECR
GECRGECQGS ADVQAEATCE ASAEVRANAE VECTEPELRV DYDAAVVADA SKLEAAVEAV
KYGMPRLLVA HAKLTGPVQQ AVKVWVRTAT DLSKSGAGAF KALGAQAMCV SGQVAAAFAA
VADVQASFSV SVEASVSVSG AAGASM
|
|---|
| |