| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2401 |
|---|
| Symbol | |
|---|
| ID | 8544787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3323934 |
|---|
| End bp | 3325244 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646387100 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003266831 |
|---|
| Protein GI | 262195622 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.16241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.851432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGA GGCGAGCCCG CATCGTCGCC GCGGCGCTGG CAACAGCGGC GCTGGGGTTG
CCGAGCGTGT GGGCGCCGGC CGCGCTCGAG CGCGCGCTCG GCGGCGTCGC CCACGCCGAG
GACCGCGCCG ACGTCACCAC CACCTATTAC CAAGAGCAAC GCCGCGGCGG CCTCGGCGGC
CTCACCGTGA TCCATCCGCA GGCCGACCTC AGCGTCGACC TCGGCGAGAC CACCACCGTG
TCGGCCGGCT ACTCGGCCGA CGTGGTCAGC GGCGCCACCC CGGCCGTGTA CCAGGTCGAC
GCGGTCTCGG CCGCGACCAC CTTCGAGGAC GTGCGCCACG AGGGCCACCT CAGCCTGGGC
TTTGCCGGCA GCCGCTCGCG CCTGTCGCTC ACCGCCGGCA CCGCGGTCGA ACGCGACTAC
GCATCGCTGA TCATCGGTGG CTCGGGCTCG GTCGACCTGC CGGGCAAGAA CACCACCTTC
GCGCTGTCGT ACACGCACAA TTTCGACCAG GTGTGCGACA AAGAAAACGG CCTGCTCACG
CCGCTCGAGC GGCTGGCGCT CGAGGGCAGC GATCCGTGCG AGAAGCAGGC CATTCTGGTC
GAGGACACGC CCGGCATGAC CGTGTGGCGC TCGCTCGACA TCGACACCTT GCAGGCCACG
CTGACGCAGA ACCTGAGCCC GCGCGCGGTG CTGCAGGTGG GCGCCTTTGG CCAGGTGCTG
CGCGGCTTCC AGTCCAACCC CTATCGCCGC GTGCGCATCG GCGACCTGCT GCCGCAGGAG
TCGGTGCCCA GCAACCGCGG CCGCGCCGCG CTGATGTTGC GGGTCAACCG CTTCATCCCC
GCGGTGCGCG GCGCGCTGCA CGTCATGGGG CGCGGCTACA GCGACACCTG GGGCGTCGAC
GGCGTCGCCG CCGAGATGGG CTACAGCCAG TATTTCGGAC GCAGCTTGCT GGTGCGCTTC
CGCGGCCGCT TCTCGTACCA GCAGGCGGCC ACCTTCTACA AAGACGCCTT TTACTACGAG
ACCGAGAGCA CGGCCGGCGC CTTCTTCACC GGCGACCGCG AGCTCGGCCA GGTGAGCAAC
ATCCTCGGCG GCGTCAAGCT GGCGTACGTC AAAGAGGCCG AAGAGGGTCA GGCCGTGTGG
GGCGTATTCG ACAGCCTGCA GCTCAACCTC AAGGGCGAGG CCATGCTGAT GGAAGAGTTC
GCCACCGGCA GCGTCGAGGA CAACCCCTTC GGCATCGACA ATCAGTTCCT CACCAGCGAC
CAGCTCCTCG ACGCGGTCAT CATTCAGCTC GGCCTGCTGC TGTCTTACTG A
|
|---|
| Protein sequence | MQLRRARIVA AALATAALGL PSVWAPAALE RALGGVAHAE DRADVTTTYY QEQRRGGLGG
LTVIHPQADL SVDLGETTTV SAGYSADVVS GATPAVYQVD AVSAATTFED VRHEGHLSLG
FAGSRSRLSL TAGTAVERDY ASLIIGGSGS VDLPGKNTTF ALSYTHNFDQ VCDKENGLLT
PLERLALEGS DPCEKQAILV EDTPGMTVWR SLDIDTLQAT LTQNLSPRAV LQVGAFGQVL
RGFQSNPYRR VRIGDLLPQE SVPSNRGRAA LMLRVNRFIP AVRGALHVMG RGYSDTWGVD
GVAAEMGYSQ YFGRSLLVRF RGRFSYQQAA TFYKDAFYYE TESTAGAFFT GDRELGQVSN
ILGGVKLAYV KEAEEGQAVW GVFDSLQLNL KGEAMLMEEF ATGSVEDNPF GIDNQFLTSD
QLLDAVIIQL GLLLSY
|
|---|
| |