Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2360 |
Symbol | |
ID | 8544746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 3271971 |
End bp | 3273113 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646387060 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003266791 |
Protein GI | 262195582 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.347608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0362221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGCCTGG GCTGGGCCGT CGTGGCCCGG CTCGGGGACA GCGACGATGC CCGCGCCCGC GCCGGTCGCG CAGGTCCCGC GGCGGTCGAA GTGGCCCCGA TCGAGCACGG CAGCATCGCC TGGCGACGCA GCTTCAGCGG CACCCTGGAG GCGCGCGCGC AGTTCGTGGT CGCCGCGCAT GTCAGCGGCC GCGTGGGACG CCTGCTCGTC GATCTCGCGG ACCCGGTCGA GCGCGGCCAG GTGGTCGCCG AGCTCGACGA CGACGAGCGC GTCGAGGGCG TCAGCCAGGC CGCGGCCGAG CTGGCGGTGG CCGACGCGCG TTCGGGCGAA GCCCAGGAGG CGCTCACCAT CGCCGAGCGC GAATTCGATC GCATGCGCGG CATGGGCGAG CGCGGCCTCA TCTCCGAGTC CGAGGTCGAC AGCGCCCGCG CCGAGTACCT GCAGCAGCAG GCGAGCGTAA CCGTGGCCCA GGCCGAGGTC AAGCGCGCCA CCGCGGCCCT GCGCCTGGCC CGGGTGCGCT CGGGCTACAC CAGCATCGCG GCCAACTGGA GCGGCGACGA CGCCCAGCGC GTGGTCGCCC AGCGCCACGT CGACGAGGGC GACATGGTCG CGGCCAACGC GCCGCTGTTC ACCATCGTGG CGCTGTCGCC GATCACGGCA GTCGTCCACG TGACCGAAAA AGAATACGCG CACCTGGCGC CCGGGCAGCC GGTGAGCGTG AGCACCGACG CCTATCCCGG GCGCAGCTTC GCCGGCGAGA TCCGCCGCAT CGCGCCGGTA TTCCGCGAGA GCTCGCGGCA GGCGCGGGTC GAGCTCGAGC TGCCCAACCA GGACGGCGCG CTCAAGCCGG GCATGTTCGT GCGCGCCGAC ATCGAGCTCG AGCGGGTCGA GGACACCACC CTGGTGCCCG AGATCGCCCT GGTCACCCGC GACGGCAAGA CCGGCGTCTT TCTGGTCGAG CCGAGCGGCA CCGAGGTGAG CTGGCGCGTG GTCGAGACCG GCATCCGCGA CGGCGACCGG GTCGAGGTGC GCGACGCGCT CAGCGGCCGG GTGGTGACCC TGGGGCAGCA GCTCATCGAT GACGGGTCGG CGATCGACAT CGTCGCCGAG GAGAAAGAAG CCCAGCCCGG CGAGGACACG TGA
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Protein sequence | MGLGWAVVAR LGDSDDARAR AGRAGPAAVE VAPIEHGSIA WRRSFSGTLE ARAQFVVAAH VSGRVGRLLV DLADPVERGQ VVAELDDDER VEGVSQAAAE LAVADARSGE AQEALTIAER EFDRMRGMGE RGLISESEVD SARAEYLQQQ ASVTVAQAEV KRATAALRLA RVRSGYTSIA ANWSGDDAQR VVAQRHVDEG DMVAANAPLF TIVALSPITA VVHVTEKEYA HLAPGQPVSV STDAYPGRSF AGEIRRIAPV FRESSRQARV ELELPNQDGA LKPGMFVRAD IELERVEDTT LVPEIALVTR DGKTGVFLVE PSGTEVSWRV VETGIRDGDR VEVRDALSGR VVTLGQQLID DGSAIDIVAE EKEAQPGEDT
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