| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2356 |
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| Symbol | |
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| ID | 8544742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 3266059 |
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| End bp | 3267369 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387056 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003266787 |
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| Protein GI | 262195578 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.131699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG TCGACGCGCA GCGTCGCGCC CAGCTCGAGA GCTACGACAA ACCGGCCATC
CTGCTCAGCC GCGACTACCG AATTCTGGCC GCCAACCGCG CCTATCGCAG CCGCTACCGG
CGGCCCGTGC GCGAGGGCGT GGACCAGTGC TTTCGCATCT CGCACGGCTA CGACACCCCG
TGCGACCAGA ACGGCGAGAG CTGCCCCCTG CGCGGCGCGC TCGAGTCGCG GCGCAAGCAG
CGCGTATTTC ACATCCACCA GGGCCCGCAG GGCGAAGAGC ACGTCGATGT CGCCCTGCAT
CCGCTGCTCG GCGCAGACGG CGAGGTCGAG GCCTTCATCG AGGTCATCGA TCCCGAGGTC
CAGGCCAGCG CCGTGGCCGA CGGCGTGTTC GTGGGCCGCA GCCCGGCGTT CTTGCGCGCC
GTCGAGCTGA TCCAGCGCGG CGCCCAGAGC GAGGTGCCGA TCCTGCTGCT GGGCGAGTCC
GGCACCGGCA AGGAGCTGGC CGCGCGCGCC ATCCACGACG CCAGCCAGCG CCGCCAGGGC
CCCTTCGTGC CGGTCGAGTG TTCGGGCCTG GCCGAGACCC TGTTCGAGTC CGAGCTCTTC
GGCCACGCCC GCGGCGCGTT CACGGGCGCG CACTCGCGCA AGATCGGCCT GGTCGAGGCC
GCGCGCACCG GCACCCTATT CCTCGACGAG ATCGGCGACG TACCGCTCGG CTTGCAGGTC
AAGCTGTTGC GCCTGATCGA GTCGGGCACG TATCGGCCGG TGGGCGAAGT CGCCGCGCGC
AGCGCCGATT TTCGCCTGGT GTGCGCGACC CACCGCGACC TGGCCAAGAT GGTCGCCGAC
GGCGAGTTTC GCCAGGACCT CTATTACCGC ATCAACACCT TCCCGGTACC GCTGCCGCCG
TTGCGCGAGC GCCGCGAGGA CATCCCCTTG CTCAGCGAGG CGCTCTTGCG CCGCAGCGAC
AAGACCCTGA GCCCGGAAGC GCGCGAGCGC CTGCTCGACT ACAGCTATCC CGGCAACGTG
CGCGAGCTGC GCAACCTGCT CGAGCGCGCT GCGCTGCTCG CCGACGGCCC CGAGATCTTG
CCCGAGCATC TGCCCGCGGT GCCCGCGAGC GCGCGCGTGA TCGCCGCAGC CGCCGGGGCA
GCGGCGTCGT CGCAATGGCC GTGGGGCGAT CGCATCCTGC CGCTGGCCGA GGTCGAGCGC
CGCTATCTGG CCTGGGCGGC CGAGACCCAC AGCGGCGACC GTCGGCAGCT CGCCGAGCGC
CTAGGCCTGA GCGAGCGCAC CCTGTACCGC AAGCTCAAGA CTCTCGACTG A
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| Protein sequence | MSEVDAQRRA QLESYDKPAI LLSRDYRILA ANRAYRSRYR RPVREGVDQC FRISHGYDTP
CDQNGESCPL RGALESRRKQ RVFHIHQGPQ GEEHVDVALH PLLGADGEVE AFIEVIDPEV
QASAVADGVF VGRSPAFLRA VELIQRGAQS EVPILLLGES GTGKELAARA IHDASQRRQG
PFVPVECSGL AETLFESELF GHARGAFTGA HSRKIGLVEA ARTGTLFLDE IGDVPLGLQV
KLLRLIESGT YRPVGEVAAR SADFRLVCAT HRDLAKMVAD GEFRQDLYYR INTFPVPLPP
LRERREDIPL LSEALLRRSD KTLSPEARER LLDYSYPGNV RELRNLLERA ALLADGPEIL
PEHLPAVPAS ARVIAAAAGA AASSQWPWGD RILPLAEVER RYLAWAAETH SGDRRQLAER
LGLSERTLYR KLKTLD
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