Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2355 |
Symbol | |
ID | 8544741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3265312 |
End bp | 3266025 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646387055 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003266786 |
Protein GI | 262195577 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.492471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.112839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGGT TTGGATTCTC TACCGGTGCC CTGGCGCGCG GCGATTTCAA GGGCGCGATG GCCATGCTCG CCAAACACGA GCTGCCGGCG ATCGAGCTGT CGGCGCTGCG CGACCACGAA CTGCCCGCGC TCATGCAGTG GCTGACTGAG CGTGACCTGA GCGGGTTCGA CTATGTCTCG GTGCACGCGC CGAGCCGCTT CGATACGCTC AGCGAGGCCG AGGTCGCCGA GCTGCTGCGG CCGTGTATCG CGCGCGGGTG GTCGGTGGTG CTGCACCCTA ACGTCATCGA GGATGCTGCC TGCTGGCAGC CCTTTGGCGA GCTCTTGTGC ATCGAGAACA TGGACAAGCG CAAACCCGGA CGCACGGTCG AAGAACTGGC GCCGATCTTC GAGCGGCTGC CAGACGCCTC GCTGTGCCTG GATCTCGGCC ACGCCCGCCA GATCGATACC TCCTTGGCGG TGACCCGCGC CCTGCTGCGC ACATACGCGA GCCGCGTGCG CCAGATTCAT CTCAGCGAGG TCGACGCGGC CTGCAAGCAT GCACCGATCA GCATGGCGAC GGTGTTCGCG ATGCAGACCC TGGCCCCGCG CCTGGGGCAC GTGCCCGTCA TCATCGAGTC GCAGATCCCG GAATCCGAGA TCGAGTACGA GCTCAAGATG GCGCGCCGGG CGCTGGCGTC CTGGCCGGTA GAGTCCTGCT CGTCGGCCGC CTGA
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Protein sequence | MRRFGFSTGA LARGDFKGAM AMLAKHELPA IELSALRDHE LPALMQWLTE RDLSGFDYVS VHAPSRFDTL SEAEVAELLR PCIARGWSVV LHPNVIEDAA CWQPFGELLC IENMDKRKPG RTVEELAPIF ERLPDASLCL DLGHARQIDT SLAVTRALLR TYASRVRQIH LSEVDAACKH APISMATVFA MQTLAPRLGH VPVIIESQIP ESEIEYELKM ARRALASWPV ESCSSAA
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