Gene Hoch_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2355 
Symbol 
ID8544741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3265312 
End bp3266025 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID646387055 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_003266786 
Protein GI262195577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.492471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.112839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGGT TTGGATTCTC TACCGGTGCC CTGGCGCGCG GCGATTTCAA GGGCGCGATG 
GCCATGCTCG CCAAACACGA GCTGCCGGCG ATCGAGCTGT CGGCGCTGCG CGACCACGAA
CTGCCCGCGC TCATGCAGTG GCTGACTGAG CGTGACCTGA GCGGGTTCGA CTATGTCTCG
GTGCACGCGC CGAGCCGCTT CGATACGCTC AGCGAGGCCG AGGTCGCCGA GCTGCTGCGG
CCGTGTATCG CGCGCGGGTG GTCGGTGGTG CTGCACCCTA ACGTCATCGA GGATGCTGCC
TGCTGGCAGC CCTTTGGCGA GCTCTTGTGC ATCGAGAACA TGGACAAGCG CAAACCCGGA
CGCACGGTCG AAGAACTGGC GCCGATCTTC GAGCGGCTGC CAGACGCCTC GCTGTGCCTG
GATCTCGGCC ACGCCCGCCA GATCGATACC TCCTTGGCGG TGACCCGCGC CCTGCTGCGC
ACATACGCGA GCCGCGTGCG CCAGATTCAT CTCAGCGAGG TCGACGCGGC CTGCAAGCAT
GCACCGATCA GCATGGCGAC GGTGTTCGCG ATGCAGACCC TGGCCCCGCG CCTGGGGCAC
GTGCCCGTCA TCATCGAGTC GCAGATCCCG GAATCCGAGA TCGAGTACGA GCTCAAGATG
GCGCGCCGGG CGCTGGCGTC CTGGCCGGTA GAGTCCTGCT CGTCGGCCGC CTGA
 
Protein sequence
MRRFGFSTGA LARGDFKGAM AMLAKHELPA IELSALRDHE LPALMQWLTE RDLSGFDYVS 
VHAPSRFDTL SEAEVAELLR PCIARGWSVV LHPNVIEDAA CWQPFGELLC IENMDKRKPG
RTVEELAPIF ERLPDASLCL DLGHARQIDT SLAVTRALLR TYASRVRQIH LSEVDAACKH
APISMATVFA MQTLAPRLGH VPVIIESQIP ESEIEYELKM ARRALASWPV ESCSSAA