Gene Hoch_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2315 
Symbol 
ID8544701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3219215 
End bp3220546 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content69% 
IMG OID646387020 
Productprocessing peptidase 
Protein accessionYP_003266751 
Protein GI262195542 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.276856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGA CTCTCGACGC CGAGCACACC CTCGGCCCCC GCCCCATCCA GAGATACGTG 
TGGCCCAACG GCCTGCGCGT GATTCTCGGT CCCGACCCGG CCGCGCCGGT GTTCTCGTAT
CAGACCTGGT TCCGCGTCGG CTCGCGCAAC GAGCGCCCCG GCCAGACCGG CATGGCGCAC
TTCTTCGAAC ATCTGATGTT CAACGAGACC GAAACCCTGG CCCCGGGCGA ACTCGACCGC
CTCATCGAGA ACCGCGGCGG CGACAACAAC GCGGCCACCT GGTCGGACTG GACCTTCTAC
CGCACCAGCC TGCCGGCGCG CGACCTCGAG CTGGCCGTGC GCATCGAGTC CGAGCGGCTG
CAGCGCCTGG TGCTCGAAGA GACCCAGATC GAGGCCGAGC GCGAGGTCAT CGTCAACGAG
CGCCTCGAGA ACGTCGACGA CGACGTCGAC GGCTTCCTCG ACGAGCGGCT CTACGAGCTG
GCCTTCACCA CGCACCCCTA CCGCTGGCCC ACCATCGGCT GGATGGACGA CATCCGCAGC
ATGAACAAGG CCGAGATCCG CGCCTTCTAC GACGCCTATT ACACGCCCGG CAGCGCCACC
ATCGTGCTCG TCGGCGACAT CGACACCGAG GCCGCGCTCG CGCTCATCGA CCGCTACTAC
GGCGATATCC CGGCCGGCGC CATCCCGCCC GAGCCGAGCG CGGCCGAGCC GGTCCAGACC
GGCGAACGGC GGGCCCACTT CGCCAAACCC GTGCACGCCG AGCGCATGCT CATCGGCTAC
AAGATCCCGG GCCAGTCGCA CCCCGATTGG CCGGTGCTGC AGTTCATCAG CTCGCTGCTC
TCGGGCGGCC CCTCGGCGCG CCTCTACCGC CGCCTGGTGG TCGATACCCA GATGGCCACC
TCGCTCGACT GCGCGCCCAT GCCGTTTCGC GACCCCAACC TGTTCCGCAT CGCCGTGCAT
ATGGCCCGCG ACTGCAGCGC CGCCGCCGCG CAGACCGAGG TCGACGCCAT CCTCGCCCAG
CTCGCGCACA CGCCGGTGCC CACGCGCGAA CTCGACAAGG TCAAGAACTG CGTGGAGACC
GACTTCTGGA GCGAACTCGA CGACTGCGAC GGTCGCGCCG AAGCCCTCGG CCATTTCGAG
ACCACGCTCG GCGATTTCCG CAACCTCTTC AACATGGCCG CACGCCTGGC CGCGATCACG
GCCGACGACA TCCAACGCGT GGCCGCCACC TACTTCCTGC CCGAGCAGCG CAGCGTGGTC
ATCGCCGAGC CCGATAGCGA CGACGACGAC GAAGCCGCCG ACGACAGCGG CGCGACCGAA
GGCGTGGCCT GA
 
Protein sequence
MRWTLDAEHT LGPRPIQRYV WPNGLRVILG PDPAAPVFSY QTWFRVGSRN ERPGQTGMAH 
FFEHLMFNET ETLAPGELDR LIENRGGDNN AATWSDWTFY RTSLPARDLE LAVRIESERL
QRLVLEETQI EAEREVIVNE RLENVDDDVD GFLDERLYEL AFTTHPYRWP TIGWMDDIRS
MNKAEIRAFY DAYYTPGSAT IVLVGDIDTE AALALIDRYY GDIPAGAIPP EPSAAEPVQT
GERRAHFAKP VHAERMLIGY KIPGQSHPDW PVLQFISSLL SGGPSARLYR RLVVDTQMAT
SLDCAPMPFR DPNLFRIAVH MARDCSAAAA QTEVDAILAQ LAHTPVPTRE LDKVKNCVET
DFWSELDDCD GRAEALGHFE TTLGDFRNLF NMAARLAAIT ADDIQRVAAT YFLPEQRSVV
IAEPDSDDDD EAADDSGATE GVA