| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2274 |
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| Symbol | |
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| ID | 8544660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3163861 |
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| End bp | 3165651 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646386979 |
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| Product | oligopeptide transporter, OPT family |
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| Protein accession | YP_003266710 |
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| Protein GI | 262195501 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.247185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0874432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCAGCG AGCCATCATC CCCATCGTCG CATCCGCCGC CGGGCGGGAA ATCGTCCACC
CGTCCGGGTG GCGGGCGTCC CATCCGCCGC GGCGCCTATC CCGAGCTGAC CGCGACCGCG
CTGGTCGTCG GCTATCTACT CGGCACGGTC ATCGCCGTCA GTATCGGCTA CGCGGCCCTG
ATCCTCGGCT TTAGCATCGA GGGCTCAGAG CTGGCCGCGA TCCTCGGCTT CGCCATCTTG
CGCGGCTTGC TGGGGCGCAA CAGCATCGTC GAGAACAACA TCAACCAGAC CGTGGCCAGC
GCGGTCAACG GCGCCTCCTC GGGCATGATG TTCTCGGTGC CGGCGCTGTT CATCCTCGAC
TACGCCGACG CCTTCAATCC GCTGCTGATG GTGCTCGGCT GCATCGTCGG CGCGATCCTG
GGCATCGCCT TCATCATCCC GCTGCGCAAG CAGATGATCG ACTTCAACCG GCTCACCTTC
CCCGGCGGTG TGGCCGTGGC CGCGGTGCTC AAGTCGCCGG GCGCCGGCAT GCGCAAGGCC
ATGCTCATGC TCGGCGCGGC GCTGCTCAGC GGCGTGGTGC ACGTGTTCGC GCAGGTGGCC
GAGTTCCACG ACGCCCCGGT GGGCGCGTGG CTGGGGCTGC CCGAGTACCT CAACATCACC
TTCTACGCCT CGCTGCTGAC CGTGGGCGTC GGCTTCCTGG CCGGCAAGGG CGGCGTGTTC
TTCATCGTCG GCGGCTACGC CTGCTACTTC GTGCTGGCGC CGATTCTGGC CTCGATGGGC
AAGATCCCGG GGCCCGAGGT GCTGGCACTG GCCGACGAGC CCGCGTCCGA GTGGCTGCGG
CTCACGCTGT TCCGGCCGCT GGGCATCGGC ATGCTCATCG GCGGCGCGCT CACCGGCATC
GTGCTGGCGC TGCCGCTCAT CGCCTCGGCC ATCGGCAGCA TGCGCGCGGC GGCCAAGACG
CGCTCGGAGA TGTCGGCGGA CGAGATGCCG ATCAAGCTCC TGGGCGTGGC CGTGGGCGGC
GCGGTGGTGG TGCTGCTGAT CATCGCGATT CTGTCCACCG AGGCCATGGG CATCGGCCGC
GGCCTGGTCA TGGGCGTGCT CGGCACGGCC TGGATCTGGA TCGCGGGCGT GATCCTCTCG
GAGTGCATCG GCCGCACCAA CTGGTCGCCG CTCTCGGGCA TGACGCTCAT CGGTATCACC
ATCCTCATCT TCGTCGCCAG CGGGCTGGGC GAGGCCGAGG CCGTGGTCGC CTCGGTCATG
GTCGGCGCGG CCATGTGCGT GGCCATGTCG CAGGCCACCG ACCTGATGAT GGATCTCAAG
ACCGGCTACC TGGTGGGCGC GACCCCGCGC AAGCAGCAGC TCGCCCAGTT CGCGGGCTCG
TGGCTCGGGC CCATCGTCAT CATGGTGCTG ATCTTCGTGC TGCACCGCGA CGCCGGGCTC
GGCAGCGAGC GCTTGCCGGC GCCGCAGGGC CAGGCTCTGG CCAGCATGAT CCAGGGCATC
CTGGGCGCCG ACGTGCCCCA GCATCAATAC CTGGCCGGTG CCGGCATCGG CGCCATCCTC
AGCGCCTCCG GGGTCGGCGG TCTGGGCGTG CTGGTCGGCC TCGGCTTCTA CCTGCCCTTC
AACATCGTTC TCACCTACAC CATCGGCACG CTGCTGCGTC TGGCCTCGGA CCGCTTCCTG
GGCAAGGCCT GGAGCGAAGA GGTCGGCATC CCGATGGCGG CCGGTCTGCT GGTCGGCGAG
GCCCTGGTCG GCGTCGGCGC GGCCGTGGTC CAGGTCGCCA TGGGCTCGTG A
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| Protein sequence | MSSEPSSPSS HPPPGGKSST RPGGGRPIRR GAYPELTATA LVVGYLLGTV IAVSIGYAAL
ILGFSIEGSE LAAILGFAIL RGLLGRNSIV ENNINQTVAS AVNGASSGMM FSVPALFILD
YADAFNPLLM VLGCIVGAIL GIAFIIPLRK QMIDFNRLTF PGGVAVAAVL KSPGAGMRKA
MLMLGAALLS GVVHVFAQVA EFHDAPVGAW LGLPEYLNIT FYASLLTVGV GFLAGKGGVF
FIVGGYACYF VLAPILASMG KIPGPEVLAL ADEPASEWLR LTLFRPLGIG MLIGGALTGI
VLALPLIASA IGSMRAAAKT RSEMSADEMP IKLLGVAVGG AVVVLLIIAI LSTEAMGIGR
GLVMGVLGTA WIWIAGVILS ECIGRTNWSP LSGMTLIGIT ILIFVASGLG EAEAVVASVM
VGAAMCVAMS QATDLMMDLK TGYLVGATPR KQQLAQFAGS WLGPIVIMVL IFVLHRDAGL
GSERLPAPQG QALASMIQGI LGADVPQHQY LAGAGIGAIL SASGVGGLGV LVGLGFYLPF
NIVLTYTIGT LLRLASDRFL GKAWSEEVGI PMAAGLLVGE ALVGVGAAVV QVAMGS
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