Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2262 |
Symbol | |
ID | 8544648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3144871 |
End bp | 3146091 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646386967 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_003266698 |
Protein GI | 262195489 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.146487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCGCG ATGCAGATCC ACCCTCGTCT CCGCCGCCCG CCGCGGCACG GACACGCGCG CAGCGCGTAT TGGTCGTAGA TGATGACCCC GCCAATCTGC GTTTGGTGGA GGCCTATCTC GCCGATCTCG ATGTCGAGGT GAGCACCGCG CTGAGCGGCG AGCAGGGCGT CGAGCAGGCG CGCGAGGAGC CGCCGCATCT GGTGCTGCTC GACATCATGT TGCCCGGTAT CGACGGTCTC GAGGCCTGTC GCCGCATCCG CGCGGCGCCG CGCACGCGCG ACGTGCCCGT GATCTTCATG ACCGCGCTCA GCGACCACGC GCGCAAGCTC GAGGGCTTTG GCGTCGGCGG CGTGGACTAC GTGACCAAGC CGCTGGATCG CCCGGAGCTG CTCGCCCGGG TGCGCACGCA TCTGCGCATC CAGAAAATGC ACGCCAGCCT GCAGCGGCGC AATCTCGAGC TGTCCGAGAT GGCGCGCACG CTCGAGTCGC GCACCCAAGA GCTGGCGTCG GCGAGCTCGT CGAAGAACCT GCTCTTGGCG GTGATGGCCC ACGACCTGAT GGGGCCGTTT ACGCCCATCC TGGGCTTCTC CGAGCTGCTT CGCGACAGCG CCGAGACCCT GCCGCGGACC GAGATCCGCG AGCTCGGCGG GGGCATTCAC CTGGCCGCCC AGCACTGCGT CGAGCTGCTG CAGAACCTGC TCGACTGGGC CCGACTCGAG CAGATGCAGG TGGTCAATCA CCCGCGCGCG ACCAGCCTCT TCGAGCTGGT GTCCATCGGC TGCGCCCAGG TGTCGCTGCG CGCCGAGCAG AAGAAGATCG CGCTGCGCAA CGATATCGAC CCCAGCGCCG AGGTCCACGC CGACGAGCGC CTGGTGGCCG CCGTGCTGCG CAACCTGCTG GTCAACGCCA TCAAGTTCAC GCGCGCCGGC GGCTCGGTGC AGATCGCCCA GGAGCAGCTC GCTGCGGGCA ACGATGGCGT CGCGATGTTG GCGGTGTCGG TCATCGACGA CGGCGTCGGC ATCGACGGCG ACACCTTGGT CCTGCTCAAT CAGGGCCAGC CGCTGCCCAG CACCGAGGGC ACCGAGCGCG AGCGCGGCAC CGGCCTGGGC CTATCGATCT GCCACCAGAT CGTCGGCCTC ATCGGCGGCT CGCTGTGCTT TGACAGCAGC CCGGGCCACG GCACCACGGC GACCTTTACG CTGCCGCTGA TGCGCTCGTA G
|
Protein sequence | MSRDADPPSS PPPAAARTRA QRVLVVDDDP ANLRLVEAYL ADLDVEVSTA LSGEQGVEQA REEPPHLVLL DIMLPGIDGL EACRRIRAAP RTRDVPVIFM TALSDHARKL EGFGVGGVDY VTKPLDRPEL LARVRTHLRI QKMHASLQRR NLELSEMART LESRTQELAS ASSSKNLLLA VMAHDLMGPF TPILGFSELL RDSAETLPRT EIRELGGGIH LAAQHCVELL QNLLDWARLE QMQVVNHPRA TSLFELVSIG CAQVSLRAEQ KKIALRNDID PSAEVHADER LVAAVLRNLL VNAIKFTRAG GSVQIAQEQL AAGNDGVAML AVSVIDDGVG IDGDTLVLLN QGQPLPSTEG TERERGTGLG LSICHQIVGL IGGSLCFDSS PGHGTTATFT LPLMRS
|
| |