| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2253 |
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| Symbol | |
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| ID | 8544639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3133154 |
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| End bp | 3134872 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646386958 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_003266689 |
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| Protein GI | 262195480 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0130989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.262802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATTGCT GTACACGTGC ATGGGCGCCG CTGGCGCTCG GCTGTCTGGC GGCGGCGCTG
TCGGTCACCT GTCGCCGGAC GCCTGAACCC GGGGATTTCG TCCACCTGGA CGGCGGTCGT
CCGGTGCCGC GTGATGCCGC CGTGGGCGAC GCCGATGCCG GTATGGACAT GGACATGGGC
GCGGTGTGCG CGTCGCCGAT CGCGCCGGTC GAAGACCTGG GCGATGCTGT GGTCGTCGGC
ACGGGCTCGC CCGCGAGCTG CACCGAGAGC GCGCTCGCCG AGGCGCTGAC GCGGGGCGGG
CTGGTGCGTT TCGACTGCGG CGCCGGGCCG CAGGTGGTCG AGCTCAGCGG CGAGCTGCGC
ATCACCGGCG ACACCGTGAT CGACGGCGAC AAGCGCGTGA CGTTGCGCGG CAGCGGCAAT
CACCGGCTGT TCGTGGTCGC CGCGGGCGCG GGCGAGCCCG CGCCGAGGCT CAGTCTGCAG
CGGCTCACGC TCGCGGGCGG CGCGGCCGAG GACGCCGGCG GCGCCATCCT GTGCCGCGGC
TGCGAGCTGG CGATCGTCGA CAGCGCGTTT CTCGACCACT CGGCCGGCGA AGACGGGCCC
GAGGCCGCGC GCGAGTCGGC CGGCGGCGCG ATCTTCGTAC AAGGCGGTAG CGCCACCATC
GTCGGCACCA GCTTCGCCGG CAACCGCGCG CGCAACGGCG GCGCCATCGC CGTGGTCGAC
GGCTCGCTGC GTCTGATCAA CAGCGCCGTG CGCCAGAACC AGGCCACCGG CTTCGACGAC
GAACCCGGCG TGGGCGGCAG CGGCGGCGGC GTGCTGGTAG ACGGCAGCGG CAGCCAGGCG
GTCCTGTGCG GCGTCGAGGT GCGCGGCAAC CGGGCGCGCA GCCACGGCGG CGGCGTGTTC
GTTTTCGACC GCGATCAGAG CGGCGCGTTC ACGCTCGAGC GCTCCCAGGT GATCGACAAT
CACATCGAGG ACAACAGCCC CAGCAAGGCC GGCGGGCTGT ACCTCGAGGG CATGGCGGTG
ACCATCGCCG ACAGCACCGT GGCCGGCAAC AGCTCGGTGA GCGACGGCGG CATGTACCTC
GGCACCGGCG CGCGCGTCGA GCTGCGCAAC TGCACGATTT CGGACAACAC CGCCACCCGC
TCGCTGGCCG GCGGTATCTC AATCGCGCCC GGCGTCACCG GCGAGATCCG CAACTGCACC
CTGGCCGGCA ACCGCGCCCC GGGCGAGCGC GCGTTTGCGG GCGCCATCTT CGGCGGCGAC
GGCGTGCGGC TGGCCAACTC GATCATCTGG GGGAGCGTGG TCGGCAACGA GTACGAGCCG
ATAAGCTGCG AGCGCCCGCT CATCGAGGGC GGCGGCAACC TGCAGTGGCC GATCGAGCGC
GCGGGCGCGG GCGCGGGCTC AGACGCCGAC GACGCGCCGT GCTCGGCCGA GGTCGGCTTC
GCCGACGCTG TGCTCGGACA ACTGGACGAT AACGGCGGGC CCACGCTCAC GCGTCTGCCG
GCCTCGGGCA GCCCGGCCAT CGGCCTGGGC CGCGACTGCC CCAGCGACGA CCAGCGCGGG
CTGCTGCGTC CGAGCGCGTG CACCAGCGGC GCGCTCGAGG CCGAGCCTGT GGGCGTCATC
GTGCCCGGCC CCAAGCCGCA GCCGCGGCCG CGCTCGCTCC CTGTTCCGAT CCCTATCGCT
GATCCGGCCG CCGAGCGGGC GCGCACCCGC GTGCGCTGA
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| Protein sequence | MHCCTRAWAP LALGCLAAAL SVTCRRTPEP GDFVHLDGGR PVPRDAAVGD ADAGMDMDMG
AVCASPIAPV EDLGDAVVVG TGSPASCTES ALAEALTRGG LVRFDCGAGP QVVELSGELR
ITGDTVIDGD KRVTLRGSGN HRLFVVAAGA GEPAPRLSLQ RLTLAGGAAE DAGGAILCRG
CELAIVDSAF LDHSAGEDGP EAARESAGGA IFVQGGSATI VGTSFAGNRA RNGGAIAVVD
GSLRLINSAV RQNQATGFDD EPGVGGSGGG VLVDGSGSQA VLCGVEVRGN RARSHGGGVF
VFDRDQSGAF TLERSQVIDN HIEDNSPSKA GGLYLEGMAV TIADSTVAGN SSVSDGGMYL
GTGARVELRN CTISDNTATR SLAGGISIAP GVTGEIRNCT LAGNRAPGER AFAGAIFGGD
GVRLANSIIW GSVVGNEYEP ISCERPLIEG GGNLQWPIER AGAGAGSDAD DAPCSAEVGF
ADAVLGQLDD NGGPTLTRLP ASGSPAIGLG RDCPSDDQRG LLRPSACTSG ALEAEPVGVI
VPGPKPQPRP RSLPVPIPIA DPAAERARTR VR
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