Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2222 |
Symbol | |
ID | 8544608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 3088787 |
End bp | 3094243 |
Gene Length | 5457 bp |
Protein Length | 1818 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646386929 |
Product | serine/threonine protein kinase |
Protein accession | YP_003266660 |
Protein GI | 262195451 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.943108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACGGGCC GGCGCATCGG CCCCGGCTCG GTCATCGACG GTCGCTACGA GATCCTCGAC CATCTCGGCA CCGGCGGCTT CGGCCTGGTC TACAAGGCGC GCCAGATCAA CACCGGCCAG CTCGTGGCGG TCAAGATCGC GCGCCACCTC GAGGGCGCGG GCGCGCGCAA CGCGGTGGCC CGCTTCCAGC GCGAGATGGA CGTGGTGGCC AAGCTCAGCC ACCCCAACAT CGTGCGCATG ATCGACGCCG GCCAGATCCC GGACGGGCCG CTGTTCACGG TGCTCGAGCT GGTGCGCGGC TGCTCGCTGG CCGAGCTGCT CGAGAAAGAG GGCCCGCTCG ATCCGGGCGA GGTCAAGCAC CTGATGATCC AGGTGCTCGA CGCGCTGTTC AGCGCCCACG ACCTGGGCGT GGTGCACCGC GATCTCAAGC CCGCCAACAT CATGGTCACC AGCGTCGGCG CGCGCCGCAA CGCCATGGTG CTCGACTTCG GCATCGCCAC CTTCGTCAAG TCGCTGCGCA CCAGCGACTA CCAGAACCTC ACCCCGGACG GCTTCATCGG CGGCACGCCC GCGTACATGG CGCCCGAGCA GTTCCGCGGG CTCGAGCCCG ACCTGCAGAC CGACATCTAC GCCTGGGGCC TCACCTTCCT CGAGTGCCTC ACCGGTCAGC GCGTGGTCCG CGGCGGCACC ATGGCCGAGA CCATGTTCCT GCACCTGCGC GAGGAGCCGC ACTCGCTGCC GCCCGTGATC GCCAAGCACC CGCTGAGCGA GATCCTGAAC AAGGCCATGG CCAAGGAGCC CGAGCAGCGC TACGCCGACA CCCGCGACGC GCTGGTGGCG CTGGTGGCCT GCGACGTCTC GGACCTGCCG CGCACGAGCC AGACCGGCCC CGGCATCGCC GTGTCGGTGC CCTCGCGGCC CGATCCTTAT AGCCAGACGC AGAACATCAG CCGCGAGCTC GAGGCCGCGG TGCGCTGGCT GCACATCTCC GATCTCCACG CCGGCGCGTC GCAGGCGGCC GAGTCGCACG AGCTGTTCGA CGCCCTCGGC CGCGAGGTCC GCGCCATGGC CCAGCGCCTG GGCCCGCCCG ATATCATCCT GCTCACCGGC GACGTCGCCT ACAGCGGCAA GCCCGAGGAG TACGAGCGCG CGACCTCGGT GCTCGACCGG CTGCGCGGCT GGCTGGGCGA GATCCACCCG GGCATGCCGG CGCCGCTGCT GCTGGCGGTG CCCGGCAACC ACGACGTGTG CTGGCCGACG CGCAAGGAGA AGCGCCTGTA CCGCGTGCTC GGCGACTACG ACCACGCCGA TGATCCCGAT GTCCGCGACC TGCGCGAGGA GCTGTGGAAC GACCGCGACG TGGGCTTGCT CGAGCCGCTG TTCGAGCCCT ACAGCGACTG GTTCCGGGCC AACGTCATCG AGCCGCTGTC CGACGACGAG CGCTGCACGC ACCTGCACGA GTCGTTCTTC CCCGGCGATT TCGGCGCGGT GTTCGATTTC CGCGGCCTGC GCCTGGGCGT GGCCGCGCTC AACTCGGCCT GGATCCAGTA CGGGCCCGGC GACTTCGAGG GCAAGCTGCA GATCCCGGCC GAGCAGCTCC GCGCGGCCTG GCCGGCCGAT ATGCCCACCT GCGAGCGCGC GCTGCTGCTG ATGCACCACC CGATGGCGTG GCTCAGCCCG CAGTCGCGCG ACATGCTGGT GCGCGATCCG CACAGCCGCG AGGGCGCGCT CTCGGGCGCG GGCTTCGACC TGCGCCTGCA CGGCCACGCC CACGGCGCCA CGGTCGAGAT CCGGCCGGCC TCGCTGGTCG AGCCCGGGGC CGCGTTCCAG GCGCCCTCGC TCTTCGGTCT GCCCACGGTC GGCGGCGCCA GCGGTCGCAG CCGCGCGCTG GGCTACGCCT GGGGCGAGCT GCGCCGCGAC GGCGGCACCC AGGTGTGGCC GCGCATCCTC TCGCCCACGC CCCACGGCGC CTGGATGTTC GGCCCCGATC AGGCCAACCA GCCGGCCGAG GCCGGCGGGG TGTGGCTGCG CCGGCCGCGT CTGCGCCCCA CCGGCACCGA TATGCAGCGC CGCGAGGAGG TCGCCTCGGT GCCCACCGCG CCGCTGCCCA CGCAGGCCAC GGCGCCGGCC TCGCCGGGCG GCCACGAGGC CGCGCTGGCC AACTACGCGG CGTGGCTGCG CGGCACCCAC GAGCGCATCG ACATGGCCGG TCTCGGCGGC GGCCACCTGC GCCTGCGCCT CGACGAGATC TTCGTGCCGC TGCGCTTTCG CAACCGCCTG TCCGAAGACG AGGGCTCCGG CGGCGACAGC GAGGAACGCG AGCTGGACGC GAGCGCGCGC GCGCGCCGCG ACACCATCGC GGTCGAGCTC GAGGAGGTCT TCGCCTACGC CGAGCCGGCC CGCCACCTGT TCATCCTGGG CGAGCCCGGC GCCGGCAAGA CCACGGCGCT GCAGAAGCTC CTGTGGACCA CGCTCTCGGC CGACGGCCGC CCGGCCTTCG ACGGCTCGCG CATCGGTCTG GACAAGAACA CGGTGCCGGT GCTGCTGCGC CTGCGCGACC TGGGCCCGAG CCAGCGCCGC CAGCCGCTGT CGGCGTTCAT CGAGGCCCAG CTCAAGCTGC TCGGGCAGCC GTCCGAGAAC GAATCGTCGT CGAACGCGGG CGGCGCCGAG GAGCCGCTCG AGCTGCCGCC CGGCTTCGGC ACCTGGCTGT GGAAGCGCGG CCACATGCTG CTGCTTCTCG ACGGCCTGGA CGAGATCGCC GACTCGGTGC AGCGCAACGA GGTCTGCCGC TACATCGAGA ACCACCTCAA GGCCGCGCGC GCCCAGGGCA TCGACGGCAT CCGCGTGGTG GTGTCGTCGC GCTACGCGGG TCTGTACAAC ACCCTGAGCG GCGACGTGCC CGCGATCGGC TTTGGCCAGG ACTTCGCCCG GCTCGAGCTG TGCCCGCTCA ACGACACCCA GATCGAGGCG CTCATCGGCA ACTGGTTCGC GGCCGCCGAG CGCGCGATGG CCTACTCGCG CGGCGACAAC CTGCTGGCCG CCTCGAGCCG CGGCCGCGAG CGCGGCGCCG CCCTGGCCGC CCAGCTCCGC CTGCCCGAGT TCGCCTCGCG GCGCATCAAG GAGCTGCTCA GCAACCCGCT GCTGCTCACG CTCTTGTGCG TCCAGGTGTT CGACGGCGGC CACGTGCCGC GCCAGCGCGT CGACTTCTTC CAGGACTGCC TGCGCACGCT CTTGCGCCGG CGCTCGCGCG ATCACGCCGA GCTGCCGCTG CTGGAGCTGA GCGACGCGCT GCGCCTGCTG CGCCCGGTGG CCTGGCTGAT GCACACCAAC GAGCGCAAGT CCGACCTGCA CCGCGCCGAG CTGCGCCGCG CCATGCACGG CGAGCTGCGC CGGCTGCAGA TCCACCGCAA CGTCAGCTTC GACGATATCC TCGACTGGCT GCACCGCGAG ACCGGGGTCA TCACCGAGTT CGCGCCCGGC GAGTTCGGCT TTTTGCACCT GAGCTTGCAG GAGTATCTGG CCGCCACCTA CGCCACGGTC CACATCGACG AGGGTCTGGC CCGGCTCACC AGCGGCTTCG GTCAGCCCTG GTGGCGCGAG GTCATCCTGC TGTTCGTCGC GCTCGGCGAG GGCCGCTACT TCGCCCCGCT GATCAGCCGC GTGCTGGCCA CGGGCAGCAC GCTCGAGCGC GAGGAGGCGT TTTTGCGCAC CTGCCTCGAG GAGGCCATGG TGCCCGACAC CTCGCCGCTG GCGCGCATCA TCGGCGACGA GCACGAGCTG AGCGCGCGGC GCACGGCCGC GCTGCGCCTG GTGCTGCACC GGGTCGACGA CCGCGTGCGC CAGGCCGCCA TGCAGGCGGC CATGCACGCG CCCCGCGGCA GCGAGCTGCG GGCGCTGGCC GAGGAGGTCG AGGCGCGCAC GCTGCCCGCG GTGGACGACG ATATGTTCGC GCTCACGGCG CCGCGGGCCA TGGTCGAGGG CAAGGAGATC GAGCTCTTGC TGGTGCCGAG CATGGCCGAG GACGCCAACC TGGCGCCGCT GGCCCGGGCG CTCACGGGCG CCGGCATCGC CACCGAGGTG CTCGACGAGG ATATCGGGCT GTCGGCGGAC GCGTTGTCCG AAATCGGCCG GCGGGCGGGC TCGGCGGCGG CCCTGGTCGG CCCCAGCGGC ATCGGCCCGT GGGAGACGCT GCACACCCGC GCGCTGCTGC ACGCCTGTCT CGACCGCGAC CGGCCGGTGG TGCCGGTGCT GATGCCGGGC GCCGGGCGCA CGCCCGAGCT GCCGCGCTTT TTGGCCCAGT ACGGCTGGGT GGATCTGCGC GCCGGCATCG ACGAGGCCGG CCTGGGCCGG CTGGTGTGGA GCGCCACCGG CAAGGAGCCG GTGCTGAGCG AGGGCGCGCG CGAGCTGCTC AACGCGCCGC GGGCGCAGTT CTTCGTCGAG CCGACCACGG GCATCCGCTT TCTGTGGATC CCGGGCGGCA CCTTCCGCAT GGGCGCCAAC GACCTGAGCA TGGCGGCGAG CCCGCCGCAC GAGGTGCGGG TGTCGCCCTT CTGGCTGTCC GAGAGCCTGG TGACCAACCG CCAGTACGAG CAGTTCGTGG TCGCCACCGG CTACGACGAG CCCATGTACT GGCGCGAGCG CCGCTACAAC GAGCCCGAGC AGCCGGTGGT CGGCGTGCGC TGGGCCGACG CCAAGGCGTT CTGCGCCTGG CTGGGCGAGA TCTCCGACTA CTCCACGGAT CTGCCCACCG AGGCGCAGTG GGAGTTCGCC GCGCGCAGCG AGGACAACCG GCCCTACCCC TGGGGCGACG AGGAGCCCGA CAACATCCGC GCGCACTTCG CCAGCCCGGG CAGCACGCCC TCGCCGGTCG GCAGCCTGCC GGCGGGCCGC GGTCCCTTCG GTACCTTCGA CCAGGCCGGC AACGTCTGGG AGTGGTGCCG CGACGTGTGG AACGCGCGCG CCTACGACAG CCGCGGCCGG CTCACCGAGG ATCCCGAGGA GGGCGGCGGC GACGCCGACA GCCACCACGT GGTCCGCGGC GGCTCGTTTC TCAGCCACCC GCTGTATCTG CGCGCCGCCT ACCGCGACCG CTACCGCGCC ATCCTGGCCG ACGATCTCGG CTTCCGCGTG GTCGCGTCGC CGGGCAGCTA CACCGGCCGG CACACGGCCC TGATCCGCAG CGGTAGCGAG GGCGAGGACG AGGGCGGCGG CCGCTCGCGC GAGGACGCGC CCCGGCGCGC GTACAAGCAC AGGGCGGTGG GCAGCGCCGG CAACCGGGCC TTGGCCAGCT CCGGGGTGCA TCCCGGCGCG GGCGACAGCG GCGCGGGCGC GGAGTTCGGC GGCGACAGCG GTATCGGGCC GGGCACGGCG CCGGACAGCG GGCTCTACAG CGGCGCCGAG AGCGCGCGCC AGCCCGGGGC CGCGGCCGGC GTGGTCCCCG ATCCCGAGCT GGAGTAG
|
Protein sequence | MTGRRIGPGS VIDGRYEILD HLGTGGFGLV YKARQINTGQ LVAVKIARHL EGAGARNAVA RFQREMDVVA KLSHPNIVRM IDAGQIPDGP LFTVLELVRG CSLAELLEKE GPLDPGEVKH LMIQVLDALF SAHDLGVVHR DLKPANIMVT SVGARRNAMV LDFGIATFVK SLRTSDYQNL TPDGFIGGTP AYMAPEQFRG LEPDLQTDIY AWGLTFLECL TGQRVVRGGT MAETMFLHLR EEPHSLPPVI AKHPLSEILN KAMAKEPEQR YADTRDALVA LVACDVSDLP RTSQTGPGIA VSVPSRPDPY SQTQNISREL EAAVRWLHIS DLHAGASQAA ESHELFDALG REVRAMAQRL GPPDIILLTG DVAYSGKPEE YERATSVLDR LRGWLGEIHP GMPAPLLLAV PGNHDVCWPT RKEKRLYRVL GDYDHADDPD VRDLREELWN DRDVGLLEPL FEPYSDWFRA NVIEPLSDDE RCTHLHESFF PGDFGAVFDF RGLRLGVAAL NSAWIQYGPG DFEGKLQIPA EQLRAAWPAD MPTCERALLL MHHPMAWLSP QSRDMLVRDP HSREGALSGA GFDLRLHGHA HGATVEIRPA SLVEPGAAFQ APSLFGLPTV GGASGRSRAL GYAWGELRRD GGTQVWPRIL SPTPHGAWMF GPDQANQPAE AGGVWLRRPR LRPTGTDMQR REEVASVPTA PLPTQATAPA SPGGHEAALA NYAAWLRGTH ERIDMAGLGG GHLRLRLDEI FVPLRFRNRL SEDEGSGGDS EERELDASAR ARRDTIAVEL EEVFAYAEPA RHLFILGEPG AGKTTALQKL LWTTLSADGR PAFDGSRIGL DKNTVPVLLR LRDLGPSQRR QPLSAFIEAQ LKLLGQPSEN ESSSNAGGAE EPLELPPGFG TWLWKRGHML LLLDGLDEIA DSVQRNEVCR YIENHLKAAR AQGIDGIRVV VSSRYAGLYN TLSGDVPAIG FGQDFARLEL CPLNDTQIEA LIGNWFAAAE RAMAYSRGDN LLAASSRGRE RGAALAAQLR LPEFASRRIK ELLSNPLLLT LLCVQVFDGG HVPRQRVDFF QDCLRTLLRR RSRDHAELPL LELSDALRLL RPVAWLMHTN ERKSDLHRAE LRRAMHGELR RLQIHRNVSF DDILDWLHRE TGVITEFAPG EFGFLHLSLQ EYLAATYATV HIDEGLARLT SGFGQPWWRE VILLFVALGE GRYFAPLISR VLATGSTLER EEAFLRTCLE EAMVPDTSPL ARIIGDEHEL SARRTAALRL VLHRVDDRVR QAAMQAAMHA PRGSELRALA EEVEARTLPA VDDDMFALTA PRAMVEGKEI ELLLVPSMAE DANLAPLARA LTGAGIATEV LDEDIGLSAD ALSEIGRRAG SAAALVGPSG IGPWETLHTR ALLHACLDRD RPVVPVLMPG AGRTPELPRF LAQYGWVDLR AGIDEAGLGR LVWSATGKEP VLSEGARELL NAPRAQFFVE PTTGIRFLWI PGGTFRMGAN DLSMAASPPH EVRVSPFWLS ESLVTNRQYE QFVVATGYDE PMYWRERRYN EPEQPVVGVR WADAKAFCAW LGEISDYSTD LPTEAQWEFA ARSEDNRPYP WGDEEPDNIR AHFASPGSTP SPVGSLPAGR GPFGTFDQAG NVWEWCRDVW NARAYDSRGR LTEDPEEGGG DADSHHVVRG GSFLSHPLYL RAAYRDRYRA ILADDLGFRV VASPGSYTGR HTALIRSGSE GEDEGGGRSR EDAPRRAYKH RAVGSAGNRA LASSGVHPGA GDSGAGAEFG GDSGIGPGTA PDSGLYSGAE SARQPGAAAG VVPDPELE
|
| |