| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2206 |
|---|
| Symbol | |
|---|
| ID | 8544592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3065367 |
|---|
| End bp | 3067172 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646386913 |
|---|
| Product | Amidohydrolase 3 |
|---|
| Protein accession | YP_003266644 |
|---|
| Protein GI | 262195435 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0568335 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATACG ATCTCGTGAT CACGGCGGGG AAGATCGTCG ATGGAACAGG GGGCACGGCC
TATCGCGGGG ATGTGGCCGT AAAAGACGGT TTCATCGCCG AGGTGAGCCG GGAACCGGGC
AGCTTACGCG GCAGCGGCGA GCGCACGATC GACGCCGAGG GCGCCATCGT CACGCCCGGC
TTCATCGATA TTCACACGCA CTACGACGGT CAGGTGTCGT GGGATGATGA GCTGGCGCCG
TCGTGCTTTC ACGGCGTCAC CACCTGCGTG ATGGGCAACT GCGGCGTCGG CTTCGCGCCG
GTGCGCGAGG ACGCGCACGA CAGCCTGATC TCGCTGATGG AGGGCGTCGA GGACATCCCC
GGCAGCGTGC TGTCCGAGGG CATCACCTGG CGCTGGCAGG ACTTTCCCGC GTATCTCGAC
GAGGTGGACA GAATCCCGCG CACCATGGAC GTGTGCGCGC AGGTACCGCA CGACGCCGTG
CGCCTGTTCA TCATGGGCGA GCGCGGCGCC GCGGGCGAGG ACGCCACCGA CCTCGATGTC
GCCGCCATGC GGGCGCTGTG CCGCGAGGCC CTGGAGGCCG GCGCGGTCGG GATCACGACC
GGTCGTACGG ATAACCACCG GACCTCGGAG GGTCGCGAGA CCCCGGCCTC GGTGGCCAGC
CGCGCCGAGC TCATGGGCAT CGCCTCGGCG CTCGACGGCC TCGACCACGG CGTCTTGCAG
GCGGTCTCGG ACTTCGACAT GGCCGACTCG CCCGAGCGCT TCGACCCCGA GTTCGACCTG
CTCGAGGACA TGGTGCGCGC CACCGGCGGC CACCCGATGT CCATGACCCT GGCCGAACGC
GACGCCGCGC CGACGCAGTG GCGGCGCATC CTCGAGCGCG TCGAGCGGGC CACCGAGCGC
GGCCTGCCCA TGCACGTGCA GGTCGCCGCC CGCGGCATCG GCGTGATCCT CGGCCTCGAC
GCCACCTTCC ACCCGTTTAT CGGACACCCG AGCTACAAGG CGCTGTCGCA GCTTCCGCTG
GCCGAGCGCG TGCGCGAGAT GCGCACGCCC GAGCTGCGCG CCCGCATCCT GTCCGAGTCG
CCGGACCGGT TGGCCGGCGA CGGCAGCGCC ATCCCGCCGC TGGTCGATCA GCTCCTGGCC
CAGCTCACCT TTGTGTCCAC GCGCCTCTAC CCCATGAGCG AGGTGCCCGA CTACGAGCCG
CGCGCCCAGG ATTCGATCTT CGCCCGAGCG CAGGCGCGCG GCGTGCAGCC GCTGGAGGCG
GTGTACGACA GTCTGCTCGA GGAGAACGGC GAAGCGCTGC TGTATTTTCC GCTGTTCAAC
TACTCGCAGT ACGATCTCAA CCACCTGTAC GAAATGATCA CCCACCCGCT GGCCCTGGCC
GGGCTCAGCG ACGGCGGCGC GCACGTGGGC ACGACCTGCG ACGCCAGCTT CCCGACCTCG
ATGCTCACCC ACTGGGTGCG CGACCGCAGC CGCGGCCCGC GTCTGCCGCT CGAGCGCGTG
GTGTCGATGA TGACGCGCCG GCCGGCGCGC TATATCGGCC TCAGCGACCG CGGTGTGGTG
GCGCCGGGCT GCAAGGCCGA TCTCAACGTC ATCGACCTCG ACGCGCTCAC GCTGTCGCGG
CCGCGCATCC ACCGCGACCT GCCGGCCGGC GGCAAGCGCT TCATCCAGCG CGCCCAGGGT
TACCGGGCGA CCATCATCTC GGGCCAGCGC GTGCTCGCCG ACGGCGCGCT CACCGACGCG
CGCCCGGGCC GCCTGGTGCG CCTCGGACGC GCGGCCCGAA ACCGCGCCGC GGCGCAGGGC
CGCTGA
|
|---|
| Protein sequence | MTYDLVITAG KIVDGTGGTA YRGDVAVKDG FIAEVSREPG SLRGSGERTI DAEGAIVTPG
FIDIHTHYDG QVSWDDELAP SCFHGVTTCV MGNCGVGFAP VREDAHDSLI SLMEGVEDIP
GSVLSEGITW RWQDFPAYLD EVDRIPRTMD VCAQVPHDAV RLFIMGERGA AGEDATDLDV
AAMRALCREA LEAGAVGITT GRTDNHRTSE GRETPASVAS RAELMGIASA LDGLDHGVLQ
AVSDFDMADS PERFDPEFDL LEDMVRATGG HPMSMTLAER DAAPTQWRRI LERVERATER
GLPMHVQVAA RGIGVILGLD ATFHPFIGHP SYKALSQLPL AERVREMRTP ELRARILSES
PDRLAGDGSA IPPLVDQLLA QLTFVSTRLY PMSEVPDYEP RAQDSIFARA QARGVQPLEA
VYDSLLEENG EALLYFPLFN YSQYDLNHLY EMITHPLALA GLSDGGAHVG TTCDASFPTS
MLTHWVRDRS RGPRLPLERV VSMMTRRPAR YIGLSDRGVV APGCKADLNV IDLDALTLSR
PRIHRDLPAG GKRFIQRAQG YRATIISGQR VLADGALTDA RPGRLVRLGR AARNRAAAQG
R
|
|---|
| |