Gene Hoch_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2021 
Symbol 
ID8544403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2790768 
End bp2791613 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content71% 
IMG OID646386724 
ProductFAD-binding 9 siderophore-interacting domain protein 
Protein accessionYP_003266459 
Protein GI262195250 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.523412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTGA CCAAGCCCGC GGCTCCGCCC TCGCAGCGCA AGACGCGTAC GCCGCCGCGT 
CTACTCGAAG TTCTGCGCAC CGTCGAGATA TCGCCGCACA TGCGCCGCAT CACCCTGGGC
GGCCCGGCCA TCGCCGGGTT TCCCGCGGAC TCGGCGGGCA CGCACATCAA GGTGTTCTTT
CCGCGCGGCG AGCAGACCGT GCCCGAGCTG CCGACCCTCG GCCCCGACGG CCCGATCTGG
CCGCCCAAGC CGCGGCGGCC GGTCACGCGC ACCTACTCGG TGCGCCGCTT CGACGCCGCG
GCCGGCGCGC TCGACATCGA CTTCGTGCTG CACGGCGACG CCGGCCCGGC CTCGAGCTGG
GCCGAACGCG CCCAGCCCGG CGACCGCATC GGCATCGCCG GTCCGGGCAA GCCCGATCCC
TTTCTCGGAC CAGCGGACTA TTACGTCTTT GCCGGCGACA TGAGCGCGCT GCCGGCCATC
GGCGGGATTC TCGAGTCGCT GCCCGAAAGC GTGCGCGGGC GCGCGTACAT CGAGATCCCC
GATCTGGGCG AGCGGCAGGA GCTGTGCTGC CGGGCCGACA TCGAGATCAC CTGGCTGTGT
CGCGAAGCGC GCGGCGTCTC GCCACTTCCT GCCGCGTTGC GCGGCATGGA CTGGCCCGAG
GGCGAGGTGT TCGCGTGGTT GGCCGGCGAG ACCTCGGCGG TGCTGGCCAT GCGCCAGTAT
CTGCGCGAGG AGCGCGCGCT GCCGCGCAGT TCGATGTACG CGGTGCCGTA CTGGAAGGCC
ACGCTGGACG AAGAGGCCTA CCACGAGGAG CGCCATCGCA TCATGGACGC GATGGAAGAG
GATTGA
 
Protein sequence
MAVTKPAAPP SQRKTRTPPR LLEVLRTVEI SPHMRRITLG GPAIAGFPAD SAGTHIKVFF 
PRGEQTVPEL PTLGPDGPIW PPKPRRPVTR TYSVRRFDAA AGALDIDFVL HGDAGPASSW
AERAQPGDRI GIAGPGKPDP FLGPADYYVF AGDMSALPAI GGILESLPES VRGRAYIEIP
DLGERQELCC RADIEITWLC REARGVSPLP AALRGMDWPE GEVFAWLAGE TSAVLAMRQY
LREERALPRS SMYAVPYWKA TLDEEAYHEE RHRIMDAMEE D