Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1956 |
Symbol | |
ID | 8544338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2697317 |
End bp | 2698789 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646386660 |
Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
Protein accession | YP_003266395 |
Protein GI | 262195186 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.204769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.223034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCA ACTTCGAAAC CTCCCTGCGC GGCAAGCGCG TGCTCGTCGT CGGCCTGGCG CAGACCGGCG TGTCCGTGGC CCGCTTCTGC GCCTCGCGCG GCGCCAGCGT CACGGTTACC GACGCCAAGT CTGCAGACCT GCTGGCCGAT CGGGTGCGCC AGCTCGACGG CTGCGCCGCG CTCGAGCTCG GCAGCCACGT GCTCGAGAGC TTCACGGGCG CCGACTACGT GCTCATGTCG CCGGGCGTGC CCGAGCTGCC CGAGATGCAG GCCGCGCGCG ACGCCGGCGC CGAGGTCATC GCCGAGATCG AGCTGGCCTA TCGCTGCCTG CACCCCGAGG CGCAGCTCAT CGCCATCACC GGCACCAACG GCAAATCCAC GACCACGGCG CTGACCGGGG CGCTGTGTCA GGCGGCCTCG GACGCGGGCG CGCCGCCGAC CTTCTGCGGC GGCAACCTGG GCAATCATCC GCTGATCGAG GCCGTCGACC ACCCGGCCAA CACCGCGGGC GGGTTCGTGG TCGCCGAAGT GGCCGGCTTC ATGCTCGAGA CCTGCGCCGG TTTTCGCCCA AACGTGGCCG CGTGCCTCAA CATCACCGAA GATCATCTCG ACCGCTACGG GACCATGGAC GTCTACGCCT CGATGAAGAC GCGCGTCTAC CGCTGGCAGC GCGCCGATGA TTTCGCCATC GCCAACGCCC ACTGCGCGCG CACGCTCGCG GGCGCCCAGG CGGCGGCCGG GCGGGTGCTG GTGTTCGACG CCGAGGCGCC GCTGCCGCCC GGCACCTGCG GCGCGTATCT GTCGCCCGAG CGCGACGAGA TCGTGCTGCG CCCCGAGGCC GACGGACCCG AGCATCGCTT TCCCGCGGCC GACCTGCCGC TGATCGGCCA GCACAACCTC GAGAACGCCA TGGCCGCGTA CCTGGCGGCG CATCTCGTCG GCGTGTCCGA CGACGCGATC CGCGCTGGAG CGCGCAGCTT TCGGCCGCAG AAGCACCGCA TGGAGCGCGT CGGCGAAAAG GGCGAGGTGG TGTTCTACGA CGACTCCAAG GGCACCAACG TGGCCGCGGT GGCGGCGTCG ATGCGCGGCT TCCCCCGGCC CGCGGTGCTG ATCGCGGGCG GCGTGGACAA GGGCGGCTCG TACGCGCCCA TGTTCGAGGC GCTGCGCGAT GTGGCCCGCG GCCTGGTGCT CATCGGTGAG GCCCGGCCGC TGATCCGCGC GGCCGCGAGC GAGGCCGGCG CCGCGTATCC CGTGGTCGAC GCCGAGAGCA TGGAAGACGC CGTGCGCAAG GCCGCCGCGC TGGCCCGCGC CGGCGACGCG GTGGTGCTGT CGCCCGCGTG CTCTAGCTAC GACATGTTCC GCAACTTTGG CGAGCGCGGC ATGGCGTTTC GCGACGCGGT GAGCGCCATC GGCGGCCGCC GTCTGGATAT CGATACCGAT CTGGTCTCAG CGTCCGAGAA AGGAGATGCC TAG
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Protein sequence | MATNFETSLR GKRVLVVGLA QTGVSVARFC ASRGASVTVT DAKSADLLAD RVRQLDGCAA LELGSHVLES FTGADYVLMS PGVPELPEMQ AARDAGAEVI AEIELAYRCL HPEAQLIAIT GTNGKSTTTA LTGALCQAAS DAGAPPTFCG GNLGNHPLIE AVDHPANTAG GFVVAEVAGF MLETCAGFRP NVAACLNITE DHLDRYGTMD VYASMKTRVY RWQRADDFAI ANAHCARTLA GAQAAAGRVL VFDAEAPLPP GTCGAYLSPE RDEIVLRPEA DGPEHRFPAA DLPLIGQHNL ENAMAAYLAA HLVGVSDDAI RAGARSFRPQ KHRMERVGEK GEVVFYDDSK GTNVAAVAAS MRGFPRPAVL IAGGVDKGGS YAPMFEALRD VARGLVLIGE ARPLIRAAAS EAGAAYPVVD AESMEDAVRK AAALARAGDA VVLSPACSSY DMFRNFGERG MAFRDAVSAI GGRRLDIDTD LVSASEKGDA
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