| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1943 |
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| Symbol | |
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| ID | 8544325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2670928 |
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| End bp | 2672652 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646386647 |
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| Product | Amidase |
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| Protein accession | YP_003266382 |
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| Protein GI | 262195173 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00712405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGTCCGCCC AGGTGTCCGC CGAACGCGCC GGCCCGGGCG ACGCCGCGGC GCTCGGCCGC
CGTCACTTCC TGCTCGGCAG CGCGCTCGGC GTGGGCGCGC TGGGGCTGGT GGGCTGCGGC
GACAACGCGG CCTGCGAGGA TCCCATCGCG GTCGACGCGG CCCCGTGCGC CGACCCGCCG
GGTGGCAACA TCGACGCCGG CGCGAACCCG AACCCGATCG ACGAGTTCGA GCTGGCCGAG
GTGTCGATCG CCGAGCTGCA GGCGGGCATG GAGGCCGGCA CCTGGAGCTC GCAGCAGATC
ACCGAGCTGT ACCTGGCGCG CATCGCGGCC GTGAGCGAGC AGGGCCCGAG CCTGCGCGCG
GTCATCGAGA CCAACCCCGA GGCCGTGAGC ATCGCCCAGG CGCTCGACGC CGAGCGCGCC
CAGGGCAACC TGCGCGGCCC GCTGCACGGC GTGCCCATCC TGCTCAAGGA CAACATCGCC
ACCGCCGACC AGACCACGAC CACGGCCGGC GCGCTGGCGC TGACGGGCTC ACAGGCGCCC
GCCGACGCCT TCGTGGCGCA GCAGCTCCGG GCCGCCGGCG CCGTGCTGCT GGGCAAGGCC
AACCTCAGCG AGTGGGCCAA TTTCCGCTCG TTTCGCGCCT CCAGCGGCTG GAGCGGGCGC
GGCCGCCAGT GCCGCAACCC CTACGTGCTC GACCGCAACC CCAGCGGCTC GTCCTCGGGC
TCGGCGGTGG CGGCCGCGGC CAGCCTGGCG GCGGCCGCGA TCGGCACCGA GACCAACGGC
TCGATCGTCA GCCCGGCCTC GGCCAACGGC GTGGTCGGCG TCAAACCCAC CGTGGGCCTC
ACCAGCCGCT CGCGCGTCAT CCCCATCTCG CACACCCAGG ACACCGTCGG CCCGCTGGCG
CGCACGGTGC GCGACGCCGC CATCGTGCTC GGCGCCATGA CCGGGGTCGA TCCCGACGAC
GAGGCCACGG CCGCGAGCGA GGGCCAAGCC TTTACCGACT ACACCCAGTT CCTCGACGCC
GGCGCGCTCT CGGGCGCGCG CATCGGCGTG GCCCGCAACC AGTTCGGCTT CCACTCCGAG
GTCGACGCGC GCATGGAGAC CGCCATCGAG GCCATGGCCG AGGCCGGCGC CGTCATCGTC
GATCCCGTGT CCATCCCGGT GTTCGGCGAC TTCCAGGGCG TCACCCTCGA CATCCTGCTG
TACGAGTTCA AGGCCGGCAT CAACGCGTAT CTCGCCGGGC TGGGCGACCC GCCGGTAAGC
ACCCTGGCCG ACATCATCGC CTACAACCGC GAGCACGAAG GCGAGTCCAT GCCCTATTTC
GGACAGGAGA TCCTGCTCGC GGCCGAGGCC AAGGGCCCGC TCAGCGAGCA GGAGTACATC
GACGCGCTGG AGCTGGCCCG CGGCATCGCG CGCGAGGACG GCATCGACCG CGCCCTGGCC
GACGACAACC TCGACGCCAT CATCGCGCCC ACCGGCGGCC CGGCCTGGCC GACCGACCTG
GTCACCGGCG ACCACTTCCT GGGCGGCAGC TCGACCGCCT CGGCCGTGGC CGGCTATCCC
ATCGTCAGCG TGCCCGCGGG CGATATCTTC GGACTGCCGG TCGGCATCTC GTTCATCGGC
GGCGCGTGGA GCGAGCCGAC TCTGCTCGCC CTGGCCTACG CCTTCGAGCA GGCCACCGGG
CACCGCAAAG CGCCCGGCTT TCTGCCGACC CTGTCGCTGC CCTGA
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| Protein sequence | MSAQVSAERA GPGDAAALGR RHFLLGSALG VGALGLVGCG DNAACEDPIA VDAAPCADPP
GGNIDAGANP NPIDEFELAE VSIAELQAGM EAGTWSSQQI TELYLARIAA VSEQGPSLRA
VIETNPEAVS IAQALDAERA QGNLRGPLHG VPILLKDNIA TADQTTTTAG ALALTGSQAP
ADAFVAQQLR AAGAVLLGKA NLSEWANFRS FRASSGWSGR GRQCRNPYVL DRNPSGSSSG
SAVAAAASLA AAAIGTETNG SIVSPASANG VVGVKPTVGL TSRSRVIPIS HTQDTVGPLA
RTVRDAAIVL GAMTGVDPDD EATAASEGQA FTDYTQFLDA GALSGARIGV ARNQFGFHSE
VDARMETAIE AMAEAGAVIV DPVSIPVFGD FQGVTLDILL YEFKAGINAY LAGLGDPPVS
TLADIIAYNR EHEGESMPYF GQEILLAAEA KGPLSEQEYI DALELARGIA REDGIDRALA
DDNLDAIIAP TGGPAWPTDL VTGDHFLGGS STASAVAGYP IVSVPAGDIF GLPVGISFIG
GAWSEPTLLA LAYAFEQATG HRKAPGFLPT LSLP
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