| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1936 |
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| Symbol | |
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| ID | 8544318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2660793 |
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| End bp | 2664017 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646386640 |
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| Product | APHP domain protein |
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| Protein accession | YP_003266375 |
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| Protein GI | 262195166 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1572] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.620471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.229187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCG CGAGTCTGGG AATCGCGGCC GCTACCAGTC TGAGTGGGTG TGCGGCCGAC
GACGCCCCAT CGGAGCGGGA CGGGGTGTTG CAGCGAGCTA GCGTCGGCTT TGATCTCGCG
GTGACCGCGG TCGAGGGCCC GGCGAGCGTG TTGCCGGGCG GCGAGGTCGA GGTGCGCGTC
GAGGTCTGTA ATCAGGGCAC CGAGTACGCC GGCGGAGAGA ACGTGTCCGT CTACCTGTCC
GAGGATGCTG TGATCGAGGC CAGCGATCAC CTACTCGGCG GCGAGCCGCT TGCGTCGCTC
GTGCCCGGCG CCTGCACCGC GCTGAACGCG CGCGGCCCCG AGCCGGGTCT GGCGTCGTCG
TACACCGTCG GCGCGATCGT CGAGAGCATG TACTCGTCCG ACGTCGTTCC TGCGAACAAC
ACGCTCGTGG GCGGCACCCT CGTGGTCGGC CACGAGGCCG ATCTGGTCGT CAAATCGGTG
ACCGGGCCGG CCAGCGTAGA GCCCGGTATG GGCTTCGAGA TCGCGGTGCT GGTGTGCAAC
CAGGGCCAGA GCCCGGCCAA CGCCGAGGTC GAGGCCGTGC TCTCGAGCGA CGGCATCATC
GACGCAGGCG ACACCGTGGT CGGTTACGGC TTCGCCATGA ACCTTCTCGA GCCCGGCACC
TGCGATACCG TGCTGGTGCC GGCGGTGGCC TCAGAGCCCG ACGGCGTGTA CACGCTGGGT
GCGCGGGTCG ATTTCAATCA GTTCGAGCCC GAGCTGGACG AGAACAACAA CACCGCCGCG
GGTTCGAGCC TGAGCATCGG CTACGGTCCG GATCTCATCG TCAAGTCGGT GAGCGGCCCG
AACAGCGCCA TGTCCGGCGG CAGCATCGCG CTCAGCGCTG AGGTGTGCAA CCAGGGCACC
GACTTCGCGT CCTTCACCGA TGTCGAGTTC TTCCTGTCGA GCGACGCGAG CATCGACAAC
ACCGACTACC CGGCGGGCTC TGCGCCGGTG TCGGAGCTCA CGCCCGGAAG CTGCACCACG
GTGGTCGCGG ACGGCTACGT CGGCGTTCCG CAGGACGGCG TGTACATGGT CGGCGCCATC
GTCGACGGCT ACGACGGCGT GTTCGAGCTG CGCGACGACA ACAACGCCAC CGCGGGCGCG
CGCGTGGGTG TGGGCTACGA GCCCGACCTG GTGATCGCCA GCATCGAGGT GCCGGCGAGC
GCGATCTCCG GGATGGATAT CGACGTCTCG GTCGAAGTCT GCAACTGGGG GCAGTCGGAG
GCCTGGGGCG TGGATGTCGA GGTGGTGCTC AGCGGCGGTG GCGGCGCGGC GGAGCCGCTC
TATTATCCGC TCGAGCCGGA TGACTGCCAC ACCCTGTCGA TAAGCGTCCC GGGCGCGCCC
GATGGCGTTC ACACGCTCAC GGCTACGGTC GACATCAGCA ACTCGGTGTC CGAAATCTTC
GAAGACAACA ACACCGCCAC CAGCGACCTC GTCGCCGTGG GCTACGAGCC CGACCTGGTC
GTGAGCGTGG ACGCGCCGGC CACCGCCCCG CTCAGCGGTG AGGCCCTCGT CGAGGTCGAG
GTGTGCAACC GCGGTCAGGC GCCGGTGCAT GGCGTGGACA TCGAGCTGTA CGGATCGACC
GACGCGACGA TCACGCGTTC GGACATGCTG GCCGGGTTCG CCCACGTGTC CTCGCTTGTG
CCGGGTCGCT GCACCAAGCG GGTTGCCGAC GCGTCTTTCT ACGCGCAGCC GGGCGGCACC
TTGTTCGCGG GCGCCATCGT CGATCCGAAT GAGTCCGTGC CCGAGCTGCG CGAGGACAAC
AACGCCAGCG CTGGCGACGC CATCGCTTTC GGCGATGAGG CCGACCTGAT CGTGAGCGCC
ATCGACGCCC CGGCGACGGC CTCGTCCGGC GCTTCGCTGA CCGCGGAGGT GACCGTGTGC
AACCAGGGCT ACAGCCCTGC GCCGGCCGAG GTCGAAGTGT GGACGCGCGG CCCCTACGGC
GACATGTTCT TCGGCTCCAG CGCCGGAGCG AGCCCGTACC TCGAGCCCGG TGATTGCGAG
CGCGTGTTCG TGTCCGGTTC CGCGCCCTAC GACGACGGCG TGCACGAATT CGTCGCCACG
GTCGATTACC ATAACTACGA GCCCGAGATC CTGGAGAACA ACAACACCAC AATCGGCGGC
CGCTTTGGCG TCGGCTACGA TGCCGACCTG TTCGTGGCCG AGGTGTCTGC GCCGCTCGCC
GGCCTGCCGG GCGACGAGTT CGGCGTGAGC GCCCGCATTT GCAACCAGGG CCAGATGCCC
AGCAGCCCCA GCTACGCGAG CTTCGTGTTG TCGCAGGATG GCCAGGCCGA TCCCGGGGAC
TTCCTCGCCG GTGACGTGTT CGTGGACATG CTCGAGCCGG GGGCGTGCGT GGACGTGAAC
GCCCAGCTCT TCGACCCGGG CTTCGGCGAC CGCTTCGAGG TGTTCGTGGT CGCCGATTGG
CAGGAGATGG TCCCCGAGAT CTTCGAGGAC AACAACGCCA CGTCGGGCGG CGTCCGCGTG
CTCGGTTACC TGCCCGAGCT GGTGATCGAG GCCGTGAGCG GTCCCGACAG CGTCATGCCC
GGCGATACCT TCGAGGTGAC GGTGCGGGTG TGCAATATCG GTACGTACGG CTCCTACGGC
ACCGATGTCG AGCTGTACAG CTCGTCGCCG AGCCCGGCCG GTCCCGGCGG ACCTGTGGGG
ATGGCGCAGG TGGCCCCGCT GCCCGCGGGC GTGTGCCAGA ACCTGCGCGT CGAGGTCTGG
GTCGATACCT ACGCCGAGGG CGCGATGACC ATCCTCGCCG AGCTCGACCC GTACGACACG
GTGACCGAGC TCATCGAGGA CAACAACAGT GGCGAGAGCG CGCCCATCGG CGTGGGCTAC
GACGCCGACT TCACCATCGC CTCGGTGTGG ACGCCGAGCA CGCTGATGGC CGGCGAGCGC
TTCACGGCCG AGGTCGAGGT GTGCAATGTC GGACAGTCGG GCGCGTCGAG CGACGTCAAA
CTCTGGTTCT CGCCGAGCAG CAGCCCCTCG AACTACGACA CCCGGGTGCC CACCGCCTGG
CTCGAGCCCG ATATGTGCCA GGTCCTGCGC GTGGTGCTCG ATGCGCCGTA TGAGCCCGGG
CAGCAGGTCA CGCTGGTGGC CGAGGTCGGC CCGGACAACT GGCAGCCCGA GCTGCGCCGG
GACAATAACC TCGGCGAGAG CGAGCCCTTC ACCGTGAGCT ACTGA
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| Protein sequence | MAAASLGIAA ATSLSGCAAD DAPSERDGVL QRASVGFDLA VTAVEGPASV LPGGEVEVRV
EVCNQGTEYA GGENVSVYLS EDAVIEASDH LLGGEPLASL VPGACTALNA RGPEPGLASS
YTVGAIVESM YSSDVVPANN TLVGGTLVVG HEADLVVKSV TGPASVEPGM GFEIAVLVCN
QGQSPANAEV EAVLSSDGII DAGDTVVGYG FAMNLLEPGT CDTVLVPAVA SEPDGVYTLG
ARVDFNQFEP ELDENNNTAA GSSLSIGYGP DLIVKSVSGP NSAMSGGSIA LSAEVCNQGT
DFASFTDVEF FLSSDASIDN TDYPAGSAPV SELTPGSCTT VVADGYVGVP QDGVYMVGAI
VDGYDGVFEL RDDNNATAGA RVGVGYEPDL VIASIEVPAS AISGMDIDVS VEVCNWGQSE
AWGVDVEVVL SGGGGAAEPL YYPLEPDDCH TLSISVPGAP DGVHTLTATV DISNSVSEIF
EDNNTATSDL VAVGYEPDLV VSVDAPATAP LSGEALVEVE VCNRGQAPVH GVDIELYGST
DATITRSDML AGFAHVSSLV PGRCTKRVAD ASFYAQPGGT LFAGAIVDPN ESVPELREDN
NASAGDAIAF GDEADLIVSA IDAPATASSG ASLTAEVTVC NQGYSPAPAE VEVWTRGPYG
DMFFGSSAGA SPYLEPGDCE RVFVSGSAPY DDGVHEFVAT VDYHNYEPEI LENNNTTIGG
RFGVGYDADL FVAEVSAPLA GLPGDEFGVS ARICNQGQMP SSPSYASFVL SQDGQADPGD
FLAGDVFVDM LEPGACVDVN AQLFDPGFGD RFEVFVVADW QEMVPEIFED NNATSGGVRV
LGYLPELVIE AVSGPDSVMP GDTFEVTVRV CNIGTYGSYG TDVELYSSSP SPAGPGGPVG
MAQVAPLPAG VCQNLRVEVW VDTYAEGAMT ILAELDPYDT VTELIEDNNS GESAPIGVGY
DADFTIASVW TPSTLMAGER FTAEVEVCNV GQSGASSDVK LWFSPSSSPS NYDTRVPTAW
LEPDMCQVLR VVLDAPYEPG QQVTLVAEVG PDNWQPELRR DNNLGESEPF TVSY
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