Gene Hoch_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1934 
Symbol 
ID8544316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2657791 
End bp2658210 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID646386639 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_003266374 
Protein GI262195165 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.358523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.679089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA AATCTGCGAT TCCCTATCTC TTTCCCCACG GCCGCGCCGA CGAGGCGCTG 
GCCCACTACA CCAAGGTCCT CGGCGCCCGC GTCGAGTCGA TCATGCGCTT CGGCGAGGGC
ATGGAGGACT GTCCCGAGGA GATGCGCCAG CGGGTGATGC ACGCCGAGCT GCGCCTCGGC
GACTCGCAGG TGTATCTCTC CGACGGGACC AAGGACATGC CGCCGCCCGA GCATCACAGC
GTCGTGGTCA CCCTCGACAT GGACGATCTC GACGAGATGC GCCGCTGCTT CGCCGGCCTG
GCCGAGGGCG GCAGCGTGCG CCAGGAGGTC CACAAGGCCT TCTTCGGCGC CTATCTCGGC
ATGGTCGTGG ACACCTTCGG CATCCAGTGG ACCCTGTACT GCGAGCCCAA GCCGGCGTGA
 
Protein sequence
MAIKSAIPYL FPHGRADEAL AHYTKVLGAR VESIMRFGEG MEDCPEEMRQ RVMHAELRLG 
DSQVYLSDGT KDMPPPEHHS VVVTLDMDDL DEMRRCFAGL AEGGSVRQEV HKAFFGAYLG
MVVDTFGIQW TLYCEPKPA